Pseudomonas aeruginosa PAO1, PA0755 (opdH)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse View in GBrowse PseudoCyc / Metabolic Pathways

Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Reference)
Locus Tag
PA0755
Name
opdH
Synonym: opdH
Replicon chromosome
Genomic location 822915 - 824198 (- strand)
Transposon Mutants 4 transposon mutants in PAO1
Transposon Mutants in orthologs 2 transposon mutants in orthologs

Cross-References

RefSeq NP_249446.1
GI 15595952
Affymetrix PA0755_at
Entrez 882059
GenBank AAG04144.1
INSDC AAG04144.1
NCBI Locus Tag PA0755
protein_id(GenBank) gb|AAG04144.1|AE004510_8|gnl|PseudoCAP|PA0755
TIGR NTL03PA00756
UniParc UPI00000C513D
UniProtKB Acc Q9I5H4
UniProtKB ID Q9I5H4_PSEAE
UniRef100 UniRef100_Q9I5H4
UniRef50 UniRef50_W6QYC2
UniRef90 UniRef90_Q9I5H4

Product

Feature Type CDS
Coding Frame 1
Product Name
cis-aconitate porin OpdH
Product Name Confidence: Class 1
Synonyms cis-aconitate porin OpdH
Evidence for Translation
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
Charge (pH 7) 2.21
Kyte-Doolittle Hydrophobicity Value -0.448
Molecular Weight (kDa) 47.0
Isoelectric Point (pI) 8.57

Subcellular localization

Individual Mappings
Localization Confidence PMID
Outer Membrane Class 3
Outer Membrane Class 1
Additional evidence for subcellular localization

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
2Y0L TRANSPORT PROTEIN 12/03/10 Crystal Structure of Pseudomonas Aeruginosa OpdO PSEUDOMONAS AERUGINOSA 2.59 X-RAY DIFFRACTION 100.0
3T20 MEMBRANE PROTEIN 07/22/11 Crystal structure of Pseudomonas aeruginosa OccK5 (OpdH) PSEUDOMONAS AERUGINOSA 2.6 X-RAY DIFFRACTION 100.0

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 21 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000729 (860 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA0755
Search term: opdH

References

Genome-wide identification of Pseudomonas aeruginosa exported proteins using a consensus computational strategy combined with a laboratory-based PhoA fusion screen.
Lewenza S, Gardy JL, Brinkman FS, Hancock RE
Genome Res. 2005 Feb;15(2):321-9
PubMed ID: 15687295