Pseudomonas aeruginosa PAO1, PA1140

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse View in GBrowse PseudoCyc / Metabolic Pathways

Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Reference)
Locus Tag
PA1140
Name
Synonym: ylbA
Replicon chromosome
Genomic location 1231256 - 1232092 (- strand)
Transposon Mutants 3 transposon mutants in PAO1
Transposon Mutants in orthologs 1 transposon mutants in orthologs

Cross-References

RefSeq NP_249831.1
GI 15596337
Affymetrix PA1140_at
DNASU PaCD00006525
Entrez 878039
GenBank AAG04529.1
INSDC AAG04529.1
NCBI Locus Tag PA1140
protein_id(GenBank) gb|AAG04529.1|AE004544_1|gnl|PseudoCAP|PA1140
TIGR NTL03PA01141
UniParc UPI00000C526D
UniProtKB Acc Q9I4J5
UniProtKB ID Q9I4J5_PSEAE
UniRef100 UniRef100_W0YNT3
UniRef50 UniRef50_H5T882
UniRef90 UniRef90_W0YNT3

Product

Feature Type CDS
Coding Frame 1
Product Name
conserved hypothetical protein
Product Name Confidence: Class 4
Synonyms
Evidence for Translation
Charge (pH 7) -4.94
Kyte-Doolittle Hydrophobicity Value -0.347
Molecular Weight (kDa) 31.6
Isoelectric Point (pI) 6.32

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
1SQ4 STRUCTURAL GENOMICS, UNKNOWN FUNCTION 03/17/04 Crystal Structure of the Putative Glyoxylate Induced Protein from Pseudomonas aeruginosa, Northeast Structural Genomics Target PaR14 PSEUDOMONAS AERUGINOSA 2.7 X-RAY DIFFRACTION 100.0

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 74 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001100 (389 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA1140

References

No references are associated with this feature.