Pseudomonas aeruginosa PAO1, PA1167

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse View in GBrowse PseudoCyc / Metabolic Pathways

Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Reference)
Locus Tag
PA1167
Name
Replicon chromosome
Genomic location 1266111 - 1266782 (+ strand)
Transposon Mutants 2 transposon mutants in PAO1
Transposon Mutants in orthologs 2 transposon mutants in orthologs

Cross-References

RefSeq NP_249858.1
GI 15596364
Affymetrix PA1167_at
DNASU PaCD00006537
Entrez 878215
GenBank AAG04556.1
INSDC AAG04556.1
NCBI Locus Tag PA1167
protein_id(GenBank) gb|AAG04556.1|AE004547_2|gnl|PseudoCAP|PA1167
TIGR NTL03PA01168
UniParc UPI00000C5285
UniProtKB Acc Q9I4H0
UniProtKB ID Q9I4H0_PSEAE
UniRef100 UniRef100_Q9I4H0
UniRef50 UniRef50_W0YM96
UniRef90 UniRef90_W0YM96

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Product Name Confidence: Class 4
Synonyms
Evidence for Translation
Charge (pH 7) 5.71
Kyte-Doolittle Hydrophobicity Value -0.600
Molecular Weight (kDa) 25.1
Isoelectric Point (pI) 9.88

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
1VAV LYASE 02/19/04 Crystal structure of alginate lyase PA1167 from Pseudomonas aeruginosa at 2.0 A resolution PSEUDOMONAS AERUGINOSA 2.0 X-RAY DIFFRACTION 100.0

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 24 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001125 (796 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA1167

References

Alginate lyase from Klebsiella pneumoniae, subsp. aerogenes: gene cloning, sequence analysis and high-level production in Escherichia coli.
Baron AJ, Wong TY, Hicks SJ, Gacesa P, Willcock D, McPherson MJ
Gene 1994 May;143(1):61-6
PubMed ID: 8200539