Pseudomonas aeruginosa PAO1, PA1234

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse View in GBrowse PseudoCyc / Metabolic Pathways

Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Reference)
Locus Tag
PA1234
Name
Replicon chromosome
Genomic location 1334950 - 1335453 (- strand)
Transposon Mutants 1 transposon mutants in PAO1

Cross-References

RefSeq NP_249925.1
GI 15596431
Affymetrix PA1234_at
DNASU PaCD00006572
Entrez 881198
GenBank AAG04623.1
INSDC AAG04623.1
NCBI Locus Tag PA1234
protein_id(GenBank) gb|AAG04623.1|AE004552_13|gnl|PseudoCAP|PA1234
TIGR NTL03PA01235
UniParc UPI00000C52C3
UniProtKB Acc Q9I4A4
UniProtKB ID Q9I4A4_PSEAE
UniRef100 UniRef100_Q9I4A4
UniRef50 UniRef50_Q9I4A4
UniRef90 UniRef90_Q9I4A4

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Product Name Confidence: Class 4
Synonyms
Evidence for Translation
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
Charge (pH 7) -6.58
Kyte-Doolittle Hydrophobicity Value 0.022
Molecular Weight (kDa) 18.5
Isoelectric Point (pI) 4.64

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
3LEF IMMUNE SYSTEM 01/14/10 Crystal structure of HIV epitope-scaffold 4E10_S0_1Z6NA_001 ARTIFICIAL GENE 2.3 X-RAY DIFFRACTION 94.5
1Z6N STRUCTURAL GENOMICS, UNKNOWN FUNCTION 03/22/05 1.5 A Crystal Structure of a Protein of Unknown Function PA1234 from Pseudomonas aeruginosa PSEUDOMONAS AERUGINOSA 1.5 X-RAY DIFFRACTION 100.0

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 11 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001187 (315 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA1234

References

No references are associated with this feature.