Pseudomonas aeruginosa PAO1, PA1397

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse View in GBrowse PseudoCyc / Metabolic Pathways

Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Reference)
Locus Tag
PA1397
Name
Replicon chromosome
Genomic location 1518914 - 1519546 (+ strand)
Transposon Mutants 2 transposon mutants in PAO1

Cross-References

RefSeq NP_250088.1
GI 15596594
Affymetrix PA1397_at
DNASU PaCD00006643
Entrez 879330
GenBank AAG04786.1
INSDC AAG04786.1
NCBI Locus Tag PA1397
protein_id(GenBank) gb|AAG04786.1|AE004569_4|gnl|PseudoCAP|PA1397
TIGR NTL03PA01398
UniParc UPI00000C535A
UniProtKB Acc Q9I3U7
UniProtKB ID Q9I3U7_PSEAE
UniRef100 UniRef100_W0YNW9
UniRef50 UniRef50_Q4K6Y3
UniRef90 UniRef90_W0YNW9

Product

Feature Type CDS
Coding Frame 1
Product Name
probable two-component response regulator
Product Name Confidence: Class 3
Synonyms
Evidence for Translation
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
Charge (pH 7) -4.28
Kyte-Doolittle Hydrophobicity Value 0.017
Molecular Weight (kDa) 23.0
Isoelectric Point (pI) 5.14

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 499 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001318 (724 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA1397

References

The agmR gene, an environmentally responsive gene, complements defective glpR, which encodes the putative activator for glycerol metabolism in Pseudomonas aeruginosa.
Schweizer HP
J. Bacteriol. 1991 Nov;173(21):6798-806
PubMed ID: 1938886