Pseudomonas aeruginosa PAO1, PA1470

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse View in GBrowse PseudoCyc / Metabolic Pathways

Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Reference)
Locus Tag
PA1470
Name
Replicon chromosome
Genomic location 1598221 - 1598958 (+ strand)
Transposon Mutants 2 transposon mutants in PAO1
Transposon Mutants in orthologs 1 transposon mutants in orthologs

Cross-References

RefSeq NP_250161.1
GI 15596667
Affymetrix PA1470_at
Entrez 880940
GenBank AAG04859.1
INSDC AAG04859.1
NCBI Locus Tag PA1470
protein_id(GenBank) gb|AAG04859.1|AE004576_8|gnl|PseudoCAP|PA1470
TIGR NTL03PA01471
UniParc UPI00000C5391
UniProtKB Acc Q9I3P2
UniProtKB ID Q9I3P2_PSEAE
UniRef100 UniRef100_U8N4M8
UniRef50 UniRef50_A9AHF7
UniRef90 UniRef90_A0A072ZK04

Product

Feature Type CDS
Coding Frame 1
Product Name
probable short-chain dehydrogenase
Product Name Confidence: Class 3
Synonyms
Evidence for Translation
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
Charge (pH 7) -4.52
Kyte-Doolittle Hydrophobicity Value 0.274
Molecular Weight (kDa) 25.4
Isoelectric Point (pI) 4.91

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown (This protein may have multiple localization sites) Class 3
Unknown (This protein may have multiple localization sites) Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 652 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001385 (377 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA1470

Human Homologs

Ensembl 94, assembly GRCh38.p12
dehydrogenase/reductase 2 [Source:HGNC Symbol;Acc:HGNC:18349]
E-value: 9.1e-24
Percent Identity: 32.8

References

Isolation and characterization of a cDNA clone encoding a novel short-chain alcohol dehydrogenase from Norway spruce (Picea abies L. Karst).
Bauer S, Galliano H, Pfeiffer F, Messner B, Sandermann H, Ernst D
Plant Physiol. 1993 Dec;103(4):1479-80
PubMed ID: 8290650