Pseudomonas aeruginosa UCBPP-PA14, PA14_05950 (dbpA)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse View in GBrowse

Gene Feature Overview

Strain Pseudomonas aeruginosa UCBPP-PA14
Locus Tag
PA14_05950
Name
dbpA
Replicon chromosome
Genomic location 526330 - 527706 (- strand)
Transposon Mutants 1 transposon mutants in UCBPP-PA14
Transposon Mutants in orthologs 2 transposon mutants in orthologs

Cross-References

RefSeq YP_788628.1
GI 116054184
Entrez 4383824
INSDC ABJ15420.1
NCBI Locus Tag PA14_05950
UniParc UPI000045D40C
UniProtKB Acc Q02TV8
UniProtKB ID Q02TV8_PSEAB
UniRef100 UniRef100_Q02TV8
UniRef50 UniRef50_P21693
UniRef90 UniRef90_Q9I663

Product

Feature Type CDS
Coding Frame 1
Product Name
ATP-dependent RNA helicase DbpA
Synonyms
Evidence for Translation
Charge (pH 7) 6.18
Kyte-Doolittle Hydrophobicity Value -0.038
Molecular Weight (kDa) 49.8
Isoelectric Point (pI) 8.40

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 617 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000446 (550 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA14_05950
Search term: dbpA

Human Homologs

Ensembl 94, assembly GRCh38.p12
DEAD-box helicase 42 [Source:HGNC Symbol;Acc:HGNC:18676]
E-value: 7.1e-62
Percent Identity: 40.3

References

No references are associated with this feature.