Pseudomonas aeruginosa UCBPP-PA14, PA14_08680 (tufB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas aeruginosa UCBPP-PA14 (Lee et al., 2006)
GCF_000014625.1|latest
Locus Tag
PA14_08680
Name
tufB
Replicon chromosome
Genomic location 741311 - 742504 (+ strand)
Transposon Mutants 1 transposon mutants in UCBPP-PA14
Transposon Mutants in orthologs 1 transposon mutants in orthologs

Cross-References

RefSeq YP_788842.1
GI 116052311
EC Number 3.6.5.3
Entrez 4384610
NCBI Locus Tag PA14_08680

Product

Feature Type CDS
Coding Frame 1
Product Name
elongation factor Tu
Synonyms
Evidence for Translation
Charge (pH 7) -12.75
Kyte-Doolittle Hydrophobicity Value -0.152
Molecular Weight (kDa) 43.4
Isoelectric Point (pI) 5.03

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
4ZV4 TRANSLATION 05/18/15 Structure of Tse6 in complex with EF-Tu Pseudomonas aeruginosa; Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) 3.504 X-RAY DIFFRACTION 100.0

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 669 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001434 (870 members)
Putative Inparalogs 1 predicted inparalogs
elongation factor Tu (PA14_08830) 100.0% identity

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA14_08680
Search term: tufB

Human Homologs

Ensembl 110, assembly GRCh38.p14
Tu translation elongation factor, mitochondrial [Source:HGNC Symbol;Acc:HGNC:12420]
E-value: 6.4e-135
Percent Identity: 55.9

References

No references are associated with this feature.