Strain |
Pseudomonas aeruginosa UCBPP-PA14 (Lee et al., 2006)
GCF_000014625.1|latest |
Locus Tag |
PA14_09090
|
Name |
rpsK
|
Replicon | chromosome |
Genomic location | 770346 - 770735 (+ strand) |
RefSeq | YP_788879.1 |
GI | 116052275 |
Entrez | 4382946 |
INSDC | ABJ13511.1 |
NCBI Locus Tag | PA14_09090 |
UniParc | UPI0000134C06 |
UniProtKB Acc | Q02T57 |
UniProtKB ID | RS11_PSEAB |
UniRef100 | UniRef100_C1DKN6 |
UniRef50 | UniRef50_P10789 |
UniRef90 | UniRef90_C1DKN6 |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
30S ribosomal protein S11
|
Synonyms | |
Evidence for Translation | |
Charge (pH 7) | 15.64 |
Kyte-Doolittle Hydrophobicity Value | -0.437 |
Molecular Weight (kDa) | 13.6 |
Isoelectric Point (pI) | 11.48 |
Individual Mappings | |
Additional evidence for subcellular localization |
Accession | Header | Accession Date | Compound | Source | Resolution | Method | Percent Identity |
7UNW | RIBOSOME | 04/11/22 | Pseudomonas aeruginosa 70S ribosome initiation complex bound to IF2-GDPCP (structure II-B) | Escherichia coli; Pseudomonas aeruginosa PAO1; SYNTHETIC CONSTRUCT | 2.6 | ELECTRON MICROSCOPY | 100.0 |
6SPC | RIBOSOME | 09/01/19 | Pseudomonas aeruginosa 30s ribosome from an aminoglycoside resistant clinical isolate | Pseudomonas aeruginosa | 2.95 | ELECTRON MICROSCOPY | 100.0 |
6SPF | RIBOSOME | 09/01/19 | Pseudomonas aeruginosa 70s ribosome from an aminoglycoside resistant clinical isolate | Pseudomonas aeruginosa | 2.89 | ELECTRON MICROSCOPY | 100.0 |
7UNV | RIBOSOME | 04/11/22 | Pseudomonas aeruginosa 70S ribosome initiation complex bound to IF2-GDPCP (structure II-A) | Escherichia coli; Pseudomonas aeruginosa PAO1; SYNTHETIC CONSTRUCT | 2.7 | ELECTRON MICROSCOPY | 100.0 |
7UNR | RIBOSOME | 04/11/22 | Pseudomonas aeruginosa 70S ribosome initiation complex bound to compact IF2-GDP (composite structure I-A) | Escherichia coli; Pseudomonas aeruginosa PAO1; SYNTHETIC CONSTRUCT | 2.9 | ELECTRON MICROSCOPY | 100.0 |
6SPE | RIBOSOME | 09/01/19 | Pseudomonas aeruginosa 30s ribosome from a clinical isolate | Pseudomonas aeruginosa | 3.6 | ELECTRON MICROSCOPY | 100.0 |
7UNU | RIBOSOME | 04/11/22 | Pseudomonas aeruginosa 70S ribosome initiation complex bound to compact IF2-GDP (composite structure I-B) | Escherichia coli; Pseudomonas aeruginosa PAO1; SYNTHETIC CONSTRUCT | 2.9 | ELECTRON MICROSCOPY | 100.0 |
6SPG | RIBOSOME | 09/01/19 | Pseudomonas aeruginosa 70s ribosome from a clinical isolate | Pseudomonas aeruginosa | 3.34 | ELECTRON MICROSCOPY | 100.0 |
Identified by Diamond using e-value cutoff of 0.0001 and returning alignments that span 100% of the query sequence and that have more than 95% identity.
Drug Name | Source Accession | Source DB | Version | Target Accession | Target Description | Percent Identity | Alignment Length | E-Value |
Plazomicin | DB12615 | DrugBank | 5.1.4 | L0LZJ6 | 30S ribosomal protein S11 | 79.8 | 129 | 9.2e-54 |
Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 664 genera
|
Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
Pseudomonas Ortholog Group |
POG001470 (536 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: PA14_09090
Search term: rpsK
Search term: 30S ribosomal protein S11
|
Ensembl
110, assembly
GRCh38.p14
|
mitochondrial ribosomal protein S11 [Source:HGNC Symbol;Acc:HGNC:14050]
E-value:
5.0e-20
Percent Identity:
47.3
|