Strain |
Pseudomonas aeruginosa UCBPP-PA14 (Lee et al., 2006)
GCF_000014625.1|latest |
Locus Tag |
PA14_09500
|
Name |
opmD
|
Replicon | chromosome |
Genomic location | 814846 - 816309 (- strand) |
Transposon Mutants | 1 transposon mutants in UCBPP-PA14 |
Transposon Mutants in orthologs | 2 transposon mutants in orthologs |
RefSeq | YP_788911.1 |
GI | 116052245 |
Entrez | 4382218 |
INSDC | ABJ13481.1 |
NCBI Locus Tag | PA14_09500 |
UniParc | UPI00003962EE |
UniProtKB Acc | Q02T25 |
UniProtKB ID | Q02T25_PSEAB |
UniRef100 | UniRef100_Q02T25 |
UniRef50 | UniRef50_Q02T25 |
UniRef90 | UniRef90_Q02T25 |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
outer membrane protein
|
Synonyms | |
Evidence for Translation | |
Charge (pH 7) | -5.04 |
Kyte-Doolittle Hydrophobicity Value | -0.288 |
Molecular Weight (kDa) | 53.0 |
Isoelectric Point (pI) | 5.43 |
Individual Mappings | |
Additional evidence for subcellular localization |
Identified using the Resistance Gene Identifier (RGI)
Model Name | Definition | Accession | Model Type (?) | SNP | Cutoff | Bit Score | Percent Identity | CARD Version |
OpmD | OpmD is the outer membrane channel protein of the efflux complex MexGHI-OpmD. [PMID:12937010, PMID:12917802, PMID:15817779, PMID:12177331] | ARO:3000809 | protein homolog model | Strict | 926.0 | 99.38 | 3.2.5 |
Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 288 genera
|
Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
Pseudomonas Ortholog Group |
POG001499 (305 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: PA14_09500
Search term: opmD
Search term: outer membrane protein
|