Pseudomonas aeruginosa UCBPP-PA14, PA14_10440

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas aeruginosa UCBPP-PA14 (Lee et al., 2006)
GCF_000014625.1|latest
Locus Tag
PA14_10440
Name
Replicon chromosome
Genomic location 899938 - 901194 (- strand)
Transposon Mutants 2 transposon mutants in UCBPP-PA14
Transposon Mutants in orthologs 2 transposon mutants in orthologs

Cross-References

RefSeq YP_788985.1
GI 116052171
Entrez 4382144
INSDC ABJ13407.1
NCBI Locus Tag PA14_10440
UniParc UPI00003962B0
UniProtKB Acc Q02SV1
UniProtKB ID Q02SV1_PSEAB
UniRef100 UniRef100_S0I5T0
UniRef50 UniRef50_A6UZV4
UniRef90 UniRef90_A6UZV4

Product

Feature Type CDS
Coding Frame 1
Product Name
porin
Synonyms
Evidence for Translation
Charge (pH 7) 0.59
Kyte-Doolittle Hydrophobicity Value -0.340
Molecular Weight (kDa) 46.4
Isoelectric Point (pI) 7.19

Subcellular localization

Individual Mappings
Localization Confidence PMID
Outer Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
2Y0H TRANSPORT PROTEIN 12/02/10 Crystal Structure of Pseudomonas Aeruginosa OpdL PSEUDOMONAS AERUGINOSA 2.2 X-RAY DIFFRACTION 100.0
3T0S MEMBRANE PROTEIN 07/20/11 Crystal structure of Pseudomonas aeruginosa OccK4 (OpdL) Pseudomonas aeruginosa 2.2 X-RAY DIFFRACTION 100.0

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 21 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001562 (366 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA14_10440
Search term: porin

Human Homologs

References

No references are associated with this feature.