Pseudomonas aeruginosa UCBPP-PA14, PA14_11260

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas aeruginosa UCBPP-PA14 (Lee et al., 2006)
GCF_000014625.1|latest
Locus Tag
PA14_11260
Name
Replicon chromosome
Genomic location 979801 - 980730 (+ strand)
Transposon Mutants in orthologs 1 transposon mutants in orthologs

Cross-References

RefSeq YP_789052.1
GI 116052104
Entrez 4382057
INSDC ABJ13340.1
NCBI Locus Tag PA14_11260
UniParc UPI000039627A
UniProtKB Acc Q02SN4
UniProtKB ID Q02SN4_PSEAB
UniRef100 UniRef100_S0I8S9
UniRef50 UniRef50_K9NPM9
UniRef90 UniRef90_A6V034

Product

Feature Type CDS
Coding Frame 1
Product Name
epimerase
Synonyms
Evidence for Translation
Charge (pH 7) -5.65
Kyte-Doolittle Hydrophobicity Value -0.048
Molecular Weight (kDa) 33.3
Isoelectric Point (pI) 5.39

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 647 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001617 (520 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA14_11260
Search term: epimerase

Human Homologs

Ensembl 110, assembly GRCh38.p14
UDP-glucuronate decarboxylase 1 [Source:HGNC Symbol;Acc:HGNC:17729]
E-value: 2.5e-30
Percent Identity: 31.4
Ensembl 110, assembly GRCh38.p14
UDP-glucuronate decarboxylase 1 [Source:HGNC Symbol;Acc:HGNC:17729]
E-value: 2.5e-30
Percent Identity: 31.4

References

No references are associated with this feature.