Pseudomonas aeruginosa UCBPP-PA14, PA14_12030

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas aeruginosa UCBPP-PA14 (Lee et al., 2006)
GCF_000014625.1|latest
Locus Tag
PA14_12030
Name
Replicon chromosome
Genomic location 1040070 - 1040426 (+ strand)
Transposon Mutants 1 transposon mutants in UCBPP-PA14
Transposon Mutants in orthologs 2 transposon mutants in orthologs

Cross-References

RefSeq YP_789114.1
GI 116052043
Entrez 4383492
INSDC ABJ13279.1
NCBI Locus Tag PA14_12030
UniParc UPI00000C5BBB
UniProtKB Acc Q02SH2
UniProtKB ID IOJAP_PSEAB
UniRef100 UniRef100_Q02SH2
UniRef50 UniRef50_Q02SH2
UniRef90 UniRef90_Q02SH2

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7) -8.56
Kyte-Doolittle Hydrophobicity Value -0.310
Molecular Weight (kDa) 13.1
Isoelectric Point (pI) 4.29

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Virulence Evidence

Source 1
Database PseudoCAP
Category
Evidence ECO:0000015
mutant phenotype evidence
Host Organism Caenorhabditis elegans
Notes
Infection model C. elegans slow killing assay.
Reference 22911607

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 565 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001678 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA14_12030

Human Homologs

Ensembl 110, assembly GRCh38.p14
mitochondrial assembly of ribosomal large subunit 1 [Source:HGNC Symbol;Acc:HGNC:21721]
E-value: 1.1e-10
Percent Identity: 32.8

References

No references are associated with this feature.