Pseudomonas aeruginosa UCBPP-PA14, PA14_12090

Gene Feature Overview

Strain	Pseudomonas aeruginosa UCBPP-PA14 (Lee et al., 2006) GCF_000014625.1|latest
Locus Tag	PA14_12090
Name
Replicon	chromosome
Genomic location	1045017 - 1046042 (+ strand)
Transposon Mutants	1 transposon mutants in UCBPP-PA14
Transposon Mutants in orthologs	2 transposon mutants in orthologs

Cross-References

RefSeq	YP_789119.1
GI	116052038
Entrez	4383487
INSDC	ABJ13274.1
NCBI Locus Tag	PA14_12090
UniParc	UPI000039624A
UniProtKB Acc	Q02SG7
UniProtKB ID	Q02SG7_PSEAB
UniRef100	UniRef100_W0YV15
UniRef50	UniRef50_Q9X6V6
UniRef90	UniRef90_Q9X6V6

Product

Feature Type	CDS
Coding Frame	1
Product Name	RlpA family lipoprotein
Synonyms
Evidence for Translation
Charge (pH 7)	13.37
Kyte-Doolittle Hydrophobicity Value	-0.211
Molecular Weight (kDa)	36.4
Isoelectric Point (pI)	10.10

Subcellular localization

Individual Mappings	Localization Confidence PMID Periplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

PDB 3D Structures

Accession	Header	Accession Date	Compound	Source	Resolution	Method	Percent Identity
6I0A	CELL CYCLE	10/25/18	Crystal structure of RlpA SPOR domain from Pseudomonas aeruginosa in complex with nuded glycan obtained by co-crystallization	Pseudomonas aeruginosa	1.3	X-RAY DIFFRACTION	100.0
6I09	CELL CYCLE	10/25/18	Crystal structure of RlpA SPOR domain from Pseudomonas aeruginosa in complex with denuded glycan obtained by soaking	Pseudomonas aeruginosa	1.48	X-RAY DIFFRACTION	100.0
6I0N	CELL CYCLE	10/26/18	Crystal structure of RlpA SPOR domain from Pseudomonas aeruginosa in complex with denuded glycan ended in anhNAM	Pseudomonas aeruginosa	1.4	X-RAY DIFFRACTION	100.0
6I05	CELL CYCLE	10/25/18	Crystal structure of RlpA SPOR domain from Pseudomonas aeruginosa	Pseudomonas aeruginosa	1.213	X-RAY DIFFRACTION	100.0

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 349 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG001683 (530 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PA14_12090 Search term: RlpA family lipoprotein

Human Homologs

References