Pseudomonas aeruginosa UCBPP-PA14, PA14_15960 (ffh)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas aeruginosa UCBPP-PA14 (Lee et al., 2006)
GCF_000014625.1|latest
Locus Tag
PA14_15960
Name
ffh
Replicon chromosome
Genomic location 1359462 - 1360835 (+ strand)
Transposon Mutants in orthologs 1 transposon mutants in orthologs

Cross-References

RefSeq YP_789417.1
GI 116051744
Entrez 4381632
INSDC ABJ12980.1
NCBI Locus Tag PA14_15960
UniParc UPI00000C5AED
UniProtKB Acc Q02RL9
UniProtKB ID Q02RL9_PSEAB
UniRef100 UniRef100_W0YX68
UniRef50 UniRef50_P0AGD9
UniRef90 UniRef90_Q4KHQ9

Product

Feature Type CDS
Coding Frame 1
Product Name
signal recognition particle protein Ffh
Synonyms
Evidence for Translation
Charge (pH 7) 14.23
Kyte-Doolittle Hydrophobicity Value -0.176
Molecular Weight (kDa) 49.4
Isoelectric Point (pI) 10.33

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 664 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001936 (537 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA14_15960
Search term: ffh

Human Homologs

Ensembl 110, assembly GRCh38.p14
signal recognition particle 54 [Source:HGNC Symbol;Acc:HGNC:11301]
E-value: 1.5e-42
Percent Identity: 29.7
Ensembl 110, assembly GRCh38.p14
signal recognition particle 54 [Source:HGNC Symbol;Acc:HGNC:11301]
E-value: 1.5e-42
Percent Identity: 29.7
Ensembl 110, assembly GRCh38.p14
signal recognition particle 54 [Source:HGNC Symbol;Acc:HGNC:11301]
E-value: 1.5e-42
Percent Identity: 29.7
Ensembl 110, assembly GRCh38.p14
signal recognition particle 54 [Source:HGNC Symbol;Acc:HGNC:11301]
E-value: 1.5e-42
Percent Identity: 29.7

References

No references are associated with this feature.