Pseudomonas aeruginosa UCBPP-PA14, PA14_16360

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas aeruginosa UCBPP-PA14 (Lee et al., 2006)
GCF_000014625.1|latest
Locus Tag
PA14_16360
Name
Replicon chromosome
Genomic location 1397984 - 1399846 (- strand)
Transposon Mutants 1 transposon mutants in UCBPP-PA14
Transposon Mutants in orthologs 3 transposon mutants in orthologs

Cross-References

RefSeq YP_789451.1
GI 116051710
Entrez 4384662
INSDC ABJ12946.1
NCBI Locus Tag PA14_16360
UniParc UPI0000396162
UniProtKB Acc Q02RI5
UniProtKB ID Q02RI5_PSEAB
UniRef100 UniRef100_S0I4J5
UniRef50 UniRef50_K9NF77
UniRef90 UniRef90_W0YY94

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7) -2.71
Kyte-Doolittle Hydrophobicity Value -0.319
Molecular Weight (kDa) 68.9
Isoelectric Point (pI) 6.71

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
7D9H OXIDOREDUCTASE 10/13/20 SpdH Spermidine dehydrogenase N33 truncation structure Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) 2.31 X-RAY DIFFRACTION 99.8
7D9F OXIDOREDUCTASE 10/13/20 SpdH Spermidine dehydrogenase SeMet Structure Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) 1.85 X-RAY DIFFRACTION 99.8
7D9I OXIDOREDUCTASE 10/13/20 SpdH Spermidine dehydrogenase D282A mutant Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) 2.1 X-RAY DIFFRACTION 99.7
7D9J OXIDOREDUCTASE 10/13/20 SpdH Spermidine dehydrogenase Y443A mutant Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) 2.19 X-RAY DIFFRACTION 99.7
7D9G OXIDOREDUCTASE 10/13/20 SpdH Spermidine dehydrogenase native structure Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) 2.4 X-RAY DIFFRACTION 99.8

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 18 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001969 (322 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA14_16360

Human Homologs

References

No references are associated with this feature.