Pseudomonas aeruginosa UCBPP-PA14, PA14_16530 (lysS)

Gene Feature Overview

Strain	Pseudomonas aeruginosa UCBPP-PA14 (Lee et al., 2006) GCF_000014625.1|latest
Locus Tag	PA14_16530
Name	lysS
Replicon	chromosome
Genomic location	1415600 - 1417105 (+ strand)

Cross-References

RefSeq	YP_789464.1
GI	116051697
EC Number	6.1.1.6
Entrez	4384649
INSDC	ABJ12933.1
NCBI Locus Tag	PA14_16530
UniParc	UPI0000396157
UniProtKB Acc	Q02RH2
UniProtKB ID	SYK_PSEAB
UniRef100	UniRef100_Q02RH2
UniRef50	UniRef50_Q9HXU0
UniRef90	UniRef90_Q9HXU0

Product

Feature Type	CDS
Coding Frame	1
Product Name	lysyl-tRNA synthetase
Synonyms
Evidence for Translation
Charge (pH 7)	-17.59
Kyte-Doolittle Hydrophobicity Value	-0.439
Molecular Weight (kDa)	57.3
Isoelectric Point (pI)	5.04

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 668 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG001977 (536 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PA14_16530 Search term: lysS Search term: lysyl-tRNA synthetase

Human Homologs

Ensembl 110, assembly GRCh38.p14	ENSP00000325448 lysyl-tRNA synthetase 1 [Source:HGNC Symbol;Acc:HGNC:6215] E-value: 5.9e-93 Percent Identity: 40.2
Ensembl 110, assembly GRCh38.p14	ENSP00000303043 lysyl-tRNA synthetase 1 [Source:HGNC Symbol;Acc:HGNC:6215] E-value: 5.9e-93 Percent Identity: 40.2

References