Pseudomonas aeruginosa UCBPP-PA14, PA14_17440 (truD)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas aeruginosa UCBPP-PA14 (Lee et al., 2006)
GCF_000014625.1|latest
Locus Tag
PA14_17440
Name
truD
Replicon chromosome
Genomic location 1495581 - 1496648 (+ strand)
Transposon Mutants 1 transposon mutants in UCBPP-PA14
Transposon Mutants in orthologs 3 transposon mutants in orthologs

Cross-References

RefSeq YP_789538.1
GI 116051623
EC Number 5.4.99.12
Entrez 4381589
INSDC ABJ12859.1
NCBI Locus Tag PA14_17440
UniParc UPI000039611F
UniProtKB Acc Q02R98
UniProtKB ID TRUD_PSEAB
UniRef100 UniRef100_Q02R98
UniRef50 UniRef50_Q4KHE9
UniRef90 UniRef90_Q9HY04

Product

Feature Type CDS
Coding Frame 1
Product Name
tRNA pseudouridine synthase D
Synonyms
Evidence for Translation
Charge (pH 7) -1.00
Kyte-Doolittle Hydrophobicity Value -0.210
Molecular Weight (kDa) 38.8
Isoelectric Point (pI) 6.79

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 195 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002048 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA14_17440
Search term: truD

Human Homologs

References

No references are associated with this feature.