Pseudomonas aeruginosa UCBPP-PA14, PA14_50270 (fliD)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas aeruginosa UCBPP-PA14 (Lee et al., 2006)
GCF_000014625.1|latest
Locus Tag
PA14_50270
Name
fliD
Replicon chromosome
Genomic location 4463447 - 4464871 (- strand)
Transposon Mutants 2 transposon mutants in UCBPP-PA14
Transposon Mutants in orthologs 1 transposon mutants in orthologs

Cross-References

RefSeq YP_792175.1
GI 116049023
Entrez 4380059
INSDC ABJ10259.1
NCBI Locus Tag PA14_50270
UniParc UPI000045D0AB
UniProtKB Acc Q02IR1
UniProtKB ID Q02IR1_PSEAB
UniRef100 UniRef100_Q02IR1
UniRef50 UniRef50_Q9K3C5
UniRef90 UniRef90_Q9K3C5

Product

Feature Type CDS
Coding Frame 1
Product Name
flagellar capping protein FliD
Synonyms
Evidence for Translation
Charge (pH 7) 0.01
Kyte-Doolittle Hydrophobicity Value -0.217
Molecular Weight (kDa) 49.5
Isoelectric Point (pI) 7.08

Subcellular localization

Individual Mappings
Localization Confidence PMID
Flagellar
Note: This is based on PSORTb V3.0 secondary localization prediction
 Class 3
Extracellular Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
5FHY STRUCTURAL PROTEIN 12/22/15 Crystal structure of FliD (HAP2) from Pseudomonas aeruginosa PAO1 Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) 2.201 X-RAY DIFFRACTION 99.4

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 247 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001055 (519 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA14_50270
Search term: fliD

Human Homologs

References

No references are associated with this feature.