Pseudomonas aeruginosa UCBPP-PA14, PA14_53900

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas aeruginosa UCBPP-PA14 (Lee et al., 2006)
GCF_000014625.1|latest
Locus Tag
PA14_53900
Name
Replicon chromosome
Genomic location 4778779 - 4780770 (+ strand)
Transposon Mutants in orthologs 3 transposon mutants in orthologs

Cross-References

RefSeq YP_792483.1
GI 116048717
Entrez 4381666
INSDC ABJ09953.1
NCBI Locus Tag PA14_53900
UniParc UPI0000E44B99
UniProtKB Acc Q02HV3
UniProtKB ID Q02HV3_PSEAB
UniRef100 UniRef100_A0A077JUG3
UniRef50 UniRef50_A4XXC6
UniRef90 UniRef90_A6VAH6

Product

Feature Type CDS
Coding Frame 1
Product Name
helicase
Synonyms
Evidence for Translation
Charge (pH 7) -5.91
Kyte-Doolittle Hydrophobicity Value -0.274
Molecular Weight (kDa) 75.0
Isoelectric Point (pI) 6.23

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 396 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000772 (533 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA14_53900
Search term: helicase

Human Homologs

Ensembl 110, assembly GRCh38.p14
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 [Source:HGNC Symbol;Acc:HGNC:11097]
E-value: 1.5e-75
Percent Identity: 38.3

References

No references are associated with this feature.