Pseudomonas aeruginosa UCBPP-PA14, PA14_54330 (rnc)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas aeruginosa UCBPP-PA14
Locus Tag
PA14_54330
Name
rnc
Replicon chromosome
Genomic location 4818539 - 4819228 (- strand)
Transposon Mutants 1 transposon mutants in UCBPP-PA14

Cross-References

RefSeq YP_792514.1
GI 116048686
EC Number 3.1.26.3
Entrez 4385221
INSDC ABJ09922.1
NCBI Locus Tag PA14_54330
UniParc UPI000013435B
UniProtKB Acc Q02HS2
UniProtKB ID RNC_PSEAB
UniRef100 UniRef100_B7UYX2
UniRef50 UniRef50_B7UYX2
UniRef90 UniRef90_B7UYX2

Product

Feature Type CDS
Coding Frame 1
Product Name
ribonuclease III
Synonyms
Evidence for Translation
Charge (pH 7) -1.40
Kyte-Doolittle Hydrophobicity Value -0.252
Molecular Weight (kDa) 25.5
Isoelectric Point (pI) 6.63

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 589 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000744 (552 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA14_54330
Search term: rnc
Search term: ribonuclease III

Human Homologs

Ensembl 94, assembly GRCh38.p12
dicer 1, ribonuclease III [Source:HGNC Symbol;Acc:HGNC:17098]
E-value: 2.3e-13
Percent Identity: 27.4

References

No references are associated with this feature.