Pseudomonas aeruginosa UCBPP-PA14, PA14_54520

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas aeruginosa UCBPP-PA14
Locus Tag
PA14_54520
Name
Replicon chromosome
Genomic location 4833756 - 4835039 (+ strand)
Transposon Mutants 1 transposon mutants in UCBPP-PA14
Transposon Mutants in orthologs 7 transposon mutants in orthologs

Cross-References

RefSeq YP_792530.1
GI 116048670
Entrez 4385205
INSDC ABJ09906.1
NCBI Locus Tag PA14_54520
UniParc UPI0000E44B9E
UniProtKB Acc Q02HQ6
UniProtKB ID Q02HQ6_PSEAB
UniRef100 UniRef100_Z2DM53
UniRef50 UniRef50_W6QYC2
UniRef90 UniRef90_Q9I5H4

Product

Feature Type CDS
Coding Frame 1
Product Name
porin
Synonyms
Evidence for Translation
Charge (pH 7) 2.21
Kyte-Doolittle Hydrophobicity Value -0.437
Molecular Weight (kDa) 47.0
Isoelectric Point (pI) 8.57

Subcellular localization

Individual Mappings
Localization Confidence PMID
Outer Membrane Class 3
Additional evidence for subcellular localization

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
3T20 MEMBRANE PROTEIN 07/22/11 Crystal structure of Pseudomonas aeruginosa OccK5 (OpdH) PSEUDOMONAS AERUGINOSA 2.6 X-RAY DIFFRACTION 100.0
2Y0L TRANSPORT PROTEIN 12/03/10 Crystal Structure of Pseudomonas Aeruginosa OpdO PSEUDOMONAS AERUGINOSA 2.59 X-RAY DIFFRACTION 100.0

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 21 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000729 (860 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA14_54520
Search term: porin

References

No references are associated with this feature.