Pseudomonas aeruginosa UCBPP-PA14, PA14_55650 (sbcC)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas aeruginosa UCBPP-PA14 (Lee et al., 2006)
GCF_000014625.1|latest
Locus Tag
PA14_55650
Name
sbcC
Replicon chromosome
Genomic location 4959088 - 4962723 (+ strand)
Transposon Mutants 1 transposon mutants in UCBPP-PA14
Transposon Mutants in orthologs 7 transposon mutants in orthologs

Cross-References

RefSeq YP_792627.1
GI 116052316
Entrez 4384615
INSDC ABJ13552.1
NCBI Locus Tag PA14_55650
UniParc UPI0000396317
UniProtKB Acc Q02HF9
UniProtKB ID Q02HF9_PSEAB
UniRef100 UniRef100_S0J1A8
UniRef50 UniRef50_Q9HWB8
UniRef90 UniRef90_Q9HWB8

Product

Feature Type CDS
Coding Frame 1
Product Name
exonuclease
Synonyms
Evidence for Translation
Charge (pH 7) -24.80
Kyte-Doolittle Hydrophobicity Value -0.902
Molecular Weight (kDa) 139.0
Isoelectric Point (pI) 5.45

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown (This protein may have multiple localization sites) Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 304 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003885 (531 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA14_55650
Search term: sbcC
Search term: exonuclease

Human Homologs

References

No references are associated with this feature.