Pseudomonas aeruginosa UCBPP-PA14, PA14_56890

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas aeruginosa UCBPP-PA14 (Lee et al., 2006)
GCF_000014625.1|latest
Locus Tag
PA14_56890
Name
Replicon chromosome
Genomic location 5068199 - 5071255 (+ strand)
Transposon Mutants 1 transposon mutants in UCBPP-PA14
Transposon Mutants in orthologs 11 transposon mutants in orthologs

Cross-References

RefSeq YP_792720.1
GI 116052409
Entrez 4382479
INSDC ABJ13645.1
NCBI Locus Tag PA14_56890
UniParc UPI000039635E
UniProtKB Acc Q02H66
UniProtKB ID Q02H66_PSEAB
UniRef100 UniRef100_Z2DKK6
UniRef50 UniRef50_G8Q6V3
UniRef90 UniRef90_W0YXB9

Product

Feature Type CDS
Coding Frame 1
Product Name
multidrug efflux protein
Synonyms
Evidence for Translation
Charge (pH 7) -16.64
Kyte-Doolittle Hydrophobicity Value 0.360
Molecular Weight (kDa) 110.6
Isoelectric Point (pI) 5.00

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AMR gene predictions from CARD database

Identified using the Resistance Gene Identifier (RGI)

Model Name Definition Accession Model Type (?) SNP Cutoff Bit Score Percent Identity CARD Version
MexW MexW is the RND-type membrane protein of the efflux complex MexVW-OprM. [PMID:12951344] ARO:3003031 protein homolog model Strict 1904.8 99.9 3.2.5

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 487 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001500 (799 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA14_56890

Human Homologs

References

No references are associated with this feature.