Pseudomonas aeruginosa UCBPP-PA14, PA14_58190 (gatB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas aeruginosa UCBPP-PA14 (Lee et al., 2006)
GCF_000014625.1|latest
Locus Tag
PA14_58190
Name
gatB
Replicon chromosome
Genomic location 5179126 - 5180571 (+ strand)

Cross-References

RefSeq YP_792829.1
GI 116052516
Entrez 4382606
INSDC ABJ13752.1
NCBI Locus Tag PA14_58190
UniParc UPI00003963A1
UniProtKB Acc Q02GV7
UniProtKB ID GATB_PSEAB
UniRef100 UniRef100_Q02GV7
UniRef50 UniRef50_Q92QK5
UniRef90 UniRef90_B7V024

Product

Feature Type CDS
Coding Frame 1
Product Name
aspartyl/glutamyl-tRNA amidotransferase subunit B
Synonyms
Evidence for Translation
Charge (pH 7) -11.47
Kyte-Doolittle Hydrophobicity Value -0.345
Molecular Weight (kDa) 53.1
Isoelectric Point (pI) 5.05

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
4WJ3 LIGASE/RNA 09/29/14 Crystal structure of the asparagine transamidosome from Pseudomonas aeruginosa Pseudomonas aeruginosa PAO1; SYNTHETIC CONSTRUCT 3.705 X-RAY DIFFRACTION 99.8

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 566 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004073 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA14_58190
Search term: gatB

Human Homologs

Ensembl 110, assembly GRCh38.p14
glutamyl-tRNA amidotransferase subunit B [Source:HGNC Symbol;Acc:HGNC:8849]
E-value: 3.2e-88
Percent Identity: 37.9

References

No references are associated with this feature.