Pseudomonas aeruginosa UCBPP-PA14, PA14_58380 (psdR)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas aeruginosa UCBPP-PA14 (Lee et al., 2006)
GCF_000014625.1|latest
Locus Tag
PA14_58380
Name
psdR
Replicon chromosome
Genomic location 5199828 - 5200391 (+ strand)
Transposon Mutants 1 transposon mutants in UCBPP-PA14
Transposon Mutants in orthologs 3 transposon mutants in orthologs

Cross-References

RefSeq YP_792844.1
GI 116052530
Entrez 4382620
INSDC ABJ13766.1
NCBI Locus Tag PA14_58380
UniParc UPI00000C5D3B
UniProtKB Acc Q02GU2
UniProtKB ID Q02GU2_PSEAB
UniRef100 UniRef100_W0Z0U8
UniRef50 UniRef50_A4XQJ4
UniRef90 UniRef90_B7V039

Product

Feature Type CDS
Coding Frame 1
Product Name
transcriptional regulator PsdR
Product Name Confidence: Class 2
Synonyms transcriptional regulator
Evidence for Translation
Charge (pH 7) -2.60
Kyte-Doolittle Hydrophobicity Value -0.276
Molecular Weight (kDa) 20.4
Isoelectric Point (pI) 6.24

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 285 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004087 (331 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA14_58380
Search term: psdR

Human Homologs

References

Genetic analysis of genes involved in dipeptide metabolism and cytotoxicity in Pseudomonas aeruginosa PAO1.
Kiely PD, O'Callaghan J, Abbas A, O'Gara F
Microbiology (Reading) 2008 Aug;154(Pt 8):2209-2218
PubMed ID: 18667554