Pseudomonas aeruginosa UCBPP-PA14, PA14_60600 (rtcR)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas aeruginosa UCBPP-PA14 (Lee et al., 2006)
GCF_000014625.1|latest
Locus Tag
PA14_60600
Name
rtcR
Replicon chromosome
Genomic location 5401640 - 5403235 (- strand)
Transposon Mutants 2 transposon mutants in UCBPP-PA14
Transposon Mutants in orthologs 2 transposon mutants in orthologs

Cross-References

RefSeq YP_793040.1
GI 116052723
Entrez 4385713
INSDC ABJ13959.1
NCBI Locus Tag PA14_60600
UniParc UPI0000396412
UniProtKB Acc Q02G96
UniProtKB ID Q02G96_PSEAB
UniRef100 UniRef100_Q02G96
UniRef50 UniRef50_P38035
UniRef90 UniRef90_A6VBW8

Product

Feature Type CDS
Coding Frame 1
Product Name
transcriptional regulator RtcR
Synonyms
Evidence for Translation
Charge (pH 7) 3.33
Kyte-Doolittle Hydrophobicity Value -0.402
Molecular Weight (kDa) 60.2
Isoelectric Point (pI) 8.02

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 430 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004239 (340 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA14_60600
Search term: rtcR

Human Homologs

References

No references are associated with this feature.