Pseudomonas aeruginosa UCBPP-PA14, PA14_62910 (carB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas aeruginosa UCBPP-PA14 (Lee et al., 2006)
GCF_000014625.1|latest
Locus Tag
PA14_62910
Name
carB
Replicon chromosome
Genomic location 5611793 - 5615014 (- strand)
Transposon Mutants 1 transposon mutants in UCBPP-PA14
Transposon Mutants in orthologs 3 transposon mutants in orthologs

Cross-References

RefSeq YP_793220.1
GI 116052903
EC Number 6.3.5.5
Entrez 4383205
INSDC ABJ14139.1
NCBI Locus Tag PA14_62910
UniParc UPI0000165ED6
UniProtKB Acc Q02FR6
UniProtKB ID Q02FR6_PSEAB
UniRef100 UniRef100_P38100
UniRef50 UniRef50_P00968
UniRef90 UniRef90_P38100

Product

Feature Type CDS
Coding Frame 1
Product Name
carbamoyl phosphate synthase large subunit
Synonyms
Evidence for Translation
Charge (pH 7) -33.47
Kyte-Doolittle Hydrophobicity Value -0.096
Molecular Weight (kDa) 117.3
Isoelectric Point (pI) 4.78

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 624 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004401 (534 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA14_62910
Search term: carB

Human Homologs

Ensembl 110, assembly GRCh38.p14
carbamoyl-phosphate synthase 1 [Source:HGNC Symbol;Acc:HGNC:2323]
E-value: 6.6e-227
Percent Identity: 40.8
Ensembl 110, assembly GRCh38.p14
carbamoyl-phosphate synthase 1 [Source:HGNC Symbol;Acc:HGNC:2323]
E-value: 6.6e-227
Percent Identity: 40.8
Ensembl 110, assembly GRCh38.p14
carbamoyl-phosphate synthase 1 [Source:HGNC Symbol;Acc:HGNC:2323]
E-value: 6.6e-227
Percent Identity: 40.8
Ensembl 110, assembly GRCh38.p14
carbamoyl-phosphate synthase 1 [Source:HGNC Symbol;Acc:HGNC:2323]
E-value: 6.6e-227
Percent Identity: 40.8
Ensembl 110, assembly GRCh38.p14
carbamoyl-phosphate synthase 1 [Source:HGNC Symbol;Acc:HGNC:2323]
E-value: 6.6e-227
Percent Identity: 40.8

References

No references are associated with this feature.