Pseudomonas aeruginosa UCBPP-PA14, PA14_62940 (dapB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas aeruginosa UCBPP-PA14 (Lee et al., 2006)
GCF_000014625.1|latest
Locus Tag
PA14_62940
Name
dapB
Replicon chromosome
Genomic location 5617015 - 5617821 (- strand)
Transposon Mutants 1 transposon mutants in UCBPP-PA14

Cross-References

RefSeq YP_793223.1
GI 116052906
EC Number 1.3.1.26
EC Number 1.17.1.8
Entrez 4383208
INSDC ABJ14142.1
NCBI Locus Tag PA14_62940
UniParc UPI0000128E8C
UniProtKB Acc Q02FR3
UniProtKB ID DAPB_PSEAB
UniRef100 UniRef100_B7V1H1
UniRef50 UniRef50_Q32K66
UniRef90 UniRef90_B7V1H1

Product

Feature Type CDS
Coding Frame 1
Product Name
dihydrodipicolinate reductase
Synonyms
Evidence for Translation
Charge (pH 7) -3.64
Kyte-Doolittle Hydrophobicity Value 0.071
Molecular Weight (kDa) 28.3
Isoelectric Point (pI) 5.98

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
4YWJ OXIDOREDUCTASE 03/20/15 Crystal structure of 4-hydroxy-tetrahydrodipicolinate reductase (HTPA reductase) from Pseudomonas aeruginosa Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) 1.8 X-RAY DIFFRACTION 100.0

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 588 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004403 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA14_62940
Search term: dapB

Human Homologs

References

No references are associated with this feature.