Pseudomonas aeruginosa PAO1, PA3580

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest
Locus Tag
PA3580
Name
Synonym: ybaK
Replicon chromosome
Genomic location 4012071 - 4012541 (- strand)
Transposon Mutants 2 transposon mutants in PAO1
Transposon Mutants in orthologs 1 transposon mutants in orthologs

Cross-References

RefSeq NP_252270.1
GI 15598776
Affymetrix PA3580_at
DNASU PaCD00007571
Entrez 880151
GenBank AAG06968.1
INSDC AAG06968.1
NCBI Locus Tag PA3580
protein_id(GenBank) gb|AAG06968.1|AE004778_12|gnl|PseudoCAP|PA3580
TIGR NTL03PA03580
UniParc UPI00000C4EC2
UniProtKB Acc G3XCT4
UniProtKB ID G3XCT4_PSEAE
UniRef100 UniRef100_W0YUS3
UniRef50 UniRef50_A0A076LS78
UniRef90 UniRef90_Q02R52

Product

Feature Type CDS
Coding Frame 1
Product Name
conserved hypothetical protein
Product Name Confidence: Class 4
Synonyms
Evidence for Translation
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
Charge (pH 7) 5.95
Kyte-Doolittle Hydrophobicity Value -0.060
Molecular Weight (kDa) 16.5
Isoelectric Point (pI) 10.10

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 1
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 341 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002090 (534 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA3580

Human Homologs

References

Structure and gene-polypeptide relationships of the region encoding glycerol diffusion facilitator (glpF) and glycerol kinase (glpK) of Pseudomonas aeruginosa.
Schweizer HP, Jump R, Po C
Microbiology (Reading) 1997 Apr;143 ( Pt 4):1287-1297
PubMed ID: 9141691