Strain |
Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest |
Locus Tag |
PA3588
|
Name |
Synonym: opdR |
Replicon | chromosome |
Genomic location | 4020669 - 4021919 (- strand) |
Transposon Mutants | 2 transposon mutants in PAO1 |
Transposon Mutants in orthologs | 1 transposon mutants in orthologs |
RefSeq | NP_252278.1 |
GI | 15598784 |
Affymetrix | PA3588_at |
DNASU | PaCD00007574 |
Entrez | 880221 |
GenBank | AAG06976.1 |
INSDC | AAG06976.1 |
NCBI Locus Tag | PA3588 |
protein_id(GenBank) | gb|AAG06976.1|AE004779_8|gnl|PseudoCAP|PA3588 |
TIGR | NTL03PA03588 |
UniParc | UPI00000C5A7B |
UniProtKB Acc | Q9HY38 |
UniProtKB ID | Q9HY38_PSEAE |
UniRef100 | UniRef100_S0J8K0 |
UniRef50 | UniRef50_G8PYD8 |
UniRef90 | UniRef90_S0J8K0 |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
probable porin
|
Synonyms | |
Evidence for Translation | |
Charge (pH 7) | 0.91 |
Kyte-Doolittle Hydrophobicity Value | -0.378 |
Molecular Weight (kDa) | 45.7 |
Isoelectric Point (pI) | 7.55 |
Individual Mappings | |
Additional evidence for subcellular localization |
Accession | Header | Accession Date | Compound | Source | Resolution | Method | Percent Identity |
4FSP | TRANSPORT PROTEIN | 06/27/12 | Crystal Structure of Pseudomonas aeruginosa OccK11 (OpdR) | Pseudomonas aeruginosa | 2.323 | X-RAY DIFFRACTION | 99.7 |
Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 16 genera
|
Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
Pseudomonas Ortholog Group |
POG002082 (299 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: PA3588
Search term: probable porin
|
Genome-wide identification of Pseudomonas aeruginosa exported proteins using a consensus computational strategy combined with a laboratory-based PhoA fusion screen.
Lewenza S, Gardy JL, Brinkman FS, Hancock RE
Genome Res 2005 Feb;15(2):321-9
PubMed ID: 15687295
|
Cloning and nucleotide sequence of anaerobically induced porin protein E1 (OprE) of Pseudomonas aeruginosa PAO1.
Yamano Y, Nishikawa T, Komatsu Y
Mol Microbiol 1993 May;8(5):993-1004
PubMed ID: 8394980
|