Pseudomonas aeruginosa PAO1, PA3621 (fdxA)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest
Locus Tag
PA3621
Name
fdxA
Replicon chromosome
Genomic location 4057159 - 4057482 (+ strand)
Transposon Mutants 1 transposon mutants in PAO1

Cross-References

RefSeq NP_252311.1
GI 15598817
Affymetrix PA3621_fdxA_at
DNASU PaCD00007585
Entrez 880230
GenBank AAG07009.1
INSDC AAG07009.1
NCBI Locus Tag PA3621
protein_id(GenBank) gb|AAG07009.1|AE004782_7|gnl|PseudoCAP|PA3621
TIGR NTL03PA03621
UniParc UPI00000C5A98
UniProtKB Acc Q9HY07
UniProtKB ID FER1_PSEAE
UniRef100 UniRef100_Q9HY07
UniRef50 UniRef50_P00214
UniRef90 UniRef90_P00214

Product

Feature Type CDS
Coding Frame 1
Product Name
ferredoxin I
Product Name Confidence: Class 2
Synonyms
Evidence for Translation
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
Detected by iTRAQ (PMID:21863142).
Charge (pH 7) -18.79
Kyte-Doolittle Hydrophobicity Value -0.228
Molecular Weight (kDa) 12.2
Isoelectric Point (pI) 3.73

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
1GAO ELECTRON TRANSPORT 11/30/00 CRYSTAL STRUCTURE OF THE L44S MUTANT OF FERREDOXIN I Azotobacter vinelandii 2.2 X-RAY DIFFRACTION 93.3
5FD1 ELECTRON TRANSPORT(IRON-SULFUR) 06/29/93 CRYSTAL STRUCTURES OF OXIDIZED AND REDUCED AZOTOBACTER VINELANDII FERREDOXIN AT PH 8 AND PH 6 Azotobacter vinelandii 1.9 X-RAY DIFFRACTION 94.3
1D3W ELECTRON TRANSPORT 10/01/99 Crystal structure of ferredoxin 1 d15e mutant from azotobacter vinelandii at 1.7 angstrom resolution. Azotobacter vinelandii 1.7 X-RAY DIFFRACTION 93.3
1FRL ELECTRON TRANSPORT 09/27/93 AZOTOBACTER VINELANDII FERREDOXIN I: ALTERATION OF INDIVIDUAL SURFACE CHARGES AND THE [4FE-4S] CLUSTER REDUCTION POTENTIAL Azotobacter vinelandii 2.3 X-RAY DIFFRACTION 93.3
1AXQ ELECTRON TRANSPORT 10/17/97 FERRICYANIDE OXIDIZED FDI Azotobacter vinelandii 2.1 X-RAY DIFFRACTION 94.3
1FRJ ELECTRON TRANSPORT 09/27/93 AZOTOBACTER VINELANDII FERREDOXIN I: ALTERATION OF INDIVIDUAL SURFACE CHARGES AND THE [4FE-4S] CLUSTER REDUCTION POTENTIAL Azotobacter vinelandii 2.3 X-RAY DIFFRACTION 93.3
1FDA ELECTRON TRANSPORT(IRON-SULFUR) 06/29/93 CRYSTAL STRUCTURES OF OXIDIZED AND REDUCED AZOTOBACTER VINELANDII FERREDOXIN AT PH 8 AND PH 6 Azotobacter vinelandii 2.1 X-RAY DIFFRACTION 94.3
6FD1 ELECTRON TRANSPORT 09/17/97 7-FE FERREDOXIN FROM AZOTOBACTER VINELANDII LOW TEMPERATURE, 1.35 A Azotobacter vinelandii 1.35 X-RAY DIFFRACTION 94.3
1F5B ELECTRON TRANSPORT 06/13/00 CRYSTAL STRUCTURE OF F2H FERREDOXIN 1 MUTANT FROM AZOTOBACTER VINELANDII AT 1.75 ANGSTROM RESOLUTION Azotobacter vinelandii 1.62 X-RAY DIFFRACTION 94.2
1FER ELECTRON TRANSFER(IRON-SULFUR PROTEIN) 09/02/92 STRUCTURE AT PH 6.5 OF FERREDOXIN I FROM AZOTOBACTER VINELANDII AT 2.3 ANGSTROMS RESOLUTION Azotobacter vinelandii 2.3 X-RAY DIFFRACTION 94.3
7FDR ELECTRON TRANSPORT 12/11/98 7-FE FERREDOXIN FROM AZOTOBACTER VINELANDII, NA DITHIONITE REDUCED, PH 8.5, 1.4A RESOLUTION, 100 K Azotobacter vinelandii 1.4 X-RAY DIFFRACTION 94.3
1FRI ELECTRON TRANSPORT 09/27/93 AZOTOBACTER VINELANDII FERREDOXIN I: ALTERATION OF INDIVIDUAL SURFACE CHARGES AND THE [4FE-4S] CLUSTER REDUCTION POTENTIAL Azotobacter vinelandii 2.1 X-RAY DIFFRACTION 93.3
1FRH ELECTRON TRANSPORT 09/27/93 AZOTOBACTER VINELANDII FERREDOXIN I: ALTERATION OF INDIVIDUAL SURFACE CHARGES AND THE [4FE-4S] CLUSTER REDUCTION POTENTIAL Azotobacter vinelandii 2.3 X-RAY DIFFRACTION 93.3
7FD1 ELECTRON TRANSPORT 12/11/98 7-FE FERREDOXIN FROM AZOTOBACTER VINELANDII AT PH 8.5, 100 K, 1.35 A Azotobacter vinelandii 1.3 X-RAY DIFFRACTION 94.3
1A6L ELECTRON TRANSPORT 02/26/98 T14C MUTANT OF AZOTOBACTER VINELANDII FDI Azotobacter vinelandii 2.1 X-RAY DIFFRACTION 93.3
1PC5 ELECTRON TRANSPORT 05/15/03 Crystal Structure of the P50G Mutant of Ferredoxin I at 1.8 A Resolution Azotobacter vinelandii 1.8 X-RAY DIFFRACTION 92.5
1G3O ELECTRON TRANSPORT 10/24/00 CRYSTAL STRUCTURE OF V19E MUTANT OF FERREDOXIN I Azotobacter vinelandii 1.65 X-RAY DIFFRACTION 93.3
1FDB ELECTRON TRANSPORT(IRON-SULFUR) 06/29/93 CRYSTAL STRUCTURES OF OXIDIZED AND REDUCED AZOTOBACTER VINELANDII FERREDOXIN AT PH 8 AND PH 6 Azotobacter vinelandii 2.2 X-RAY DIFFRACTION 94.3
1PC4 ELECTRON TRANSPORT 05/15/03 Crystal Structure of the P50A mutant of ferredoxin I at 1.65 A Resolution Azotobacter vinelandii 1.65 X-RAY DIFFRACTION 92.5
1FRM ELECTRON TRANSPORT 09/27/93 AZOTOBACTER VINELANDII FERREDOXIN I: ALTERATION OF INDIVIDUAL SURFACE CHARGES AND THE [4FE-4S] CLUSTER REDUCTION POTENTIAL Azotobacter vinelandii 2.3 X-RAY DIFFRACTION 93.3
1FDD ELECTRON TRANSPORT(IRON-SULFUR) 01/17/93 AZOTOBACTER VINELANDII FERREDOXIN I: ASPARTATE 15 FACILITATES PROTON TRANSFER TO THE REDUCED [3FE-4S] CLUSTER Azotobacter vinelandii 1.9 X-RAY DIFFRACTION 93.3
6FDR ELECTRON TRANSPORT 12/11/98 7-FE FERREDOXIN FROM AZOTOBACTER VINELANDII AT 100K, NA DITHIONITE REDUCED AT PH 8.5, RESOLUTION 1.4 A Azotobacter vinelandii 1.4 X-RAY DIFFRACTION 94.3

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 300 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002053 (537 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA3621
Search term: fdxA
Search term: ferredoxin I

Human Homologs

References

Azotobacter vinelandii ferredoxin I: cloning, sequencing, and mutant analysis.
Morgan TV, Lundell DJ, Burgess BK
J Biol Chem 1988 Jan 25;263(3):1370-5
PubMed ID: 2826477
Comparisons of Two Proteomic Analyses of Non-Mucoid and Mucoid Pseudomonas aeruginosa Clinical Isolates from a Cystic Fibrosis Patient.
Rao J, Damron FH, Basler M, Digiandomenico A, Sherman NE, Fox JW, Mekalanos JJ, Goldberg JB
Front Microbiol 2011;2:162
PubMed ID: 21863142