Strain |
Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest |
Locus Tag |
PA3642
|
Name |
rnhB
|
Replicon | chromosome |
Genomic location | 4080440 - 4081045 (- strand) |
Transposon Mutants | 1 transposon mutants in PAO1 |
Transposon Mutants in orthologs | 1 transposon mutants in orthologs |
RefSeq | NP_252332.1 |
GI | 15598838 |
Affymetrix | PA3642_rnhB_at |
DNASU | PaCD00007597 |
Entrez | 880498 |
GenBank | AAG07030.1 |
INSDC | AAG07030.1 |
NCBI Locus Tag | PA3642 |
protein_id(GenBank) | gb|AAG07030.1|AE004784_3|gnl|PseudoCAP|PA3642 |
TIGR | NTL03PA03642 |
UniParc | UPI00000C5AA2 |
UniProtKB Acc | Q9HXY9 |
UniProtKB ID | RNH2_PSEAE |
UniRef100 | UniRef100_Q9HXY9 |
UniRef50 | UniRef50_Q9HXY9 |
UniRef90 | UniRef90_Q9HXY9 |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
ribonuclease HII
|
Synonyms |
RNAse HII |
Evidence for Translation |
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
|
Charge (pH 7) | -1.16 |
Kyte-Doolittle Hydrophobicity Value | 0.122 |
Molecular Weight (kDa) | 21.8 |
Isoelectric Point (pI) | 6.52 |
Individual Mappings | |
Additional evidence for subcellular localization |
Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 634 genera
|
Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
Pseudomonas Ortholog Group |
POG002032 (537 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: PA3642
Search term: rnhB
Search term: ribonuclease HII
|
Isolation and characterization of a second RNase H (RNase HII) of Escherichia coli K-12 encoded by the rnhB gene.
Itaya M
Proc Natl Acad Sci U S A 1990 Nov;87(21):8587-91
PubMed ID: 2172991
|