Pseudomonas aeruginosa PAO1, PA3659

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest
Locus Tag
PA3659
Name
Synonym: dapC
Replicon chromosome
Genomic location 4098844 - 4100052 (+ strand)
Transposon Mutants 3 transposon mutants in PAO1
Transposon Mutants in orthologs 2 transposon mutants in orthologs

Cross-References

RefSeq NP_252349.1
GI 15598855
Affymetrix PA3659_at
Entrez 880570
GenBank AAG07047.1
INSDC AAG07047.1
NCBI Locus Tag PA3659
protein_id(GenBank) gb|AAG07047.1|AE004785_11|gnl|PseudoCAP|PA3659
TIGR NTL03PA03659
UniParc UPI00000C5AA6
UniProtKB Acc Q9HXY0
UniProtKB ID Q9HXY0_PSEAE
UniRef100 UniRef100_A0A080VRS3
UniRef50 UniRef50_I0HRW0
UniRef90 UniRef90_Q02RD1

Product

Feature Type CDS
Coding Frame 1
Product Name
probable aminotransferase
Product Name Confidence: Class 3
Synonyms
Evidence for Translation
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
Charge (pH 7) -6.58
Kyte-Doolittle Hydrophobicity Value -0.107
Molecular Weight (kDa) 44.5
Isoelectric Point (pI) 5.49

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 650 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002015 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA3659

Human Homologs

References

Characterization of a bordetella pertussis diaminopimelate (DAP) biosynthesis locus identifies dapC, a novel gene coding for an N-succinyl-L,L-DAP aminotransferase.
Fuchs TM, Schneider B, Krumbach K, Eggeling L, Gross R
J Bacteriol 2000 Jul;182(13):3626-31
PubMed ID: 10850974