Pseudomonas aeruginosa PAO1, PA3689

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest
Locus Tag
PA3689
Name
Synonym: yhdM
Replicon chromosome
Genomic location 4130952 - 4131422 (- strand)
Transposon Mutants 2 transposon mutants in PAO1
Transposon Mutants in orthologs 1 transposon mutants in orthologs

Cross-References

RefSeq NP_252379.1
GI 15598885
Affymetrix PA3689_at
DNASU PaCD00007617
Entrez 879126
GenBank AAG07077.1
INSDC AAG07077.1
NCBI Locus Tag PA3689
protein_id(GenBank) gb|AAG07077.1|AE004788_7|gnl|PseudoCAP|PA3689
TIGR NTL03PA03689
UniParc UPI00000C5ABE
UniProtKB Acc Q9HXV1
UniProtKB ID Q9HXV1_PSEAE
UniRef100 UniRef100_W0YV49
UniRef50 UniRef50_Q87UL6
UniRef90 UniRef90_A6V198

Product

Feature Type CDS
Coding Frame 1
Product Name
probable transcriptional regulator
Product Name Confidence: Class 3
Synonyms
Evidence for Translation
Charge (pH 7) -1.02
Kyte-Doolittle Hydrophobicity Value -0.559
Molecular Weight (kDa) 17.7
Isoelectric Point (pI) 6.78

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 382 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001988 (529 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA3689

Human Homologs

References

No references are associated with this feature.