Pseudomonas aeruginosa PAO1, PA3819

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest
Locus Tag
PA3819
Name
Synonym: ycfJ
Replicon chromosome
Genomic location 4275422 - 4275970 (- strand)
Transposon Mutants 2 transposon mutants in PAO1
Transposon Mutants in orthologs 1 transposon mutants in orthologs

Cross-References

RefSeq NP_252508.1
GI 15599014
Affymetrix PA3819_at
DNASU PaCD00007664
Entrez 879909
GenBank AAG07206.1
INSDC AAG07206.1
NCBI Locus Tag PA3819
protein_id(GenBank) gb|AAG07206.1|AE004799_12|gnl|PseudoCAP|PA3819
TIGR NTL03PA03819
UniParc UPI00000C5B26
UniProtKB Acc Q9HXI3
UniProtKB ID Q9HXI3_PSEAE
UniRef100 UniRef100_W0YYP7
UniRef50 UniRef50_P0AB36
UniRef90 UniRef90_A6V0U3

Product

Feature Type CDS
Coding Frame 1
Product Name
conserved hypothetical protein
Product Name Confidence: Class 4
Synonyms
Evidence for Translation
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
Charge (pH 7) 4.41
Kyte-Doolittle Hydrophobicity Value -0.227
Molecular Weight (kDa) 18.9
Isoelectric Point (pI) 9.37

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 60 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001847 (535 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA3819

Human Homologs

References

Genome-wide identification of Pseudomonas aeruginosa exported proteins using a consensus computational strategy combined with a laboratory-based PhoA fusion screen.
Lewenza S, Gardy JL, Brinkman FS, Hancock RE
Genome Res 2005 Feb;15(2):321-9
PubMed ID: 15687295
Intrinsic and extrinsic approaches for detecting genes in a bacterial genome.
Borodovsky M, Rudd KE, Koonin EV
Nucleic Acids Res 1994 Nov 11;22(22):4756-67
PubMed ID: 7984428