Pseudomonas aeruginosa PAO1, PA3957

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest
Locus Tag
PA3957
Name
Replicon chromosome
Genomic location 4436492 - 4437328 (- strand)
Transposon Mutants 2 transposon mutants in PAO1
Transposon Mutants in orthologs 1 transposon mutants in orthologs

Cross-References

RefSeq NP_252646.1
GI 15599152
Affymetrix PA3957_at
Entrez 878859
GenBank AAG07344.1
INSDC AAG07344.1
NCBI Locus Tag PA3957
protein_id(GenBank) gb|AAG07344.1|AE004813_11|gnl|PseudoCAP|PA3957
TIGR NTL03PA03957
UniParc UPI00000C5B99
UniProtKB Acc Q9HX59
UniProtKB ID Q9HX59_PSEAE
UniRef100 UniRef100_W0YXA8
UniRef50 UniRef50_A4XYR7
UniRef90 UniRef90_Q02SC6

Product

Feature Type CDS
Coding Frame 1
Product Name
probable short-chain dehydrogenase
Product Name Confidence: Class 3
Synonyms
Evidence for Translation
Charge (pH 7) 15.55
Kyte-Doolittle Hydrophobicity Value 0.230
Molecular Weight (kDa) 29.9
Isoelectric Point (pI) 11.18

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 652 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001721 (342 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA3957

Human Homologs

Ensembl 110, assembly GRCh38.p14
dehydrogenase/reductase 7B [Source:HGNC Symbol;Acc:HGNC:24547]
E-value: 2.1e-36
Percent Identity: 36.1
Ensembl 110, assembly GRCh38.p14
dehydrogenase/reductase 7B [Source:HGNC Symbol;Acc:HGNC:24547]
E-value: 2.1e-36
Percent Identity: 36.1

References

No references are associated with this feature.