Pseudomonas aeruginosa PAO1, PA3966

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest
Locus Tag
PA3966
Name
Replicon chromosome
Genomic location 4445689 - 4445898 (+ strand)
Transposon Mutants 2 transposon mutants in PAO1
Transposon Mutants in orthologs 1 transposon mutants in orthologs

Cross-References

RefSeq NP_252655.1
GI 15599161
Affymetrix PA3966_at
Entrez 878878
GenBank AAG07353.1
INSDC AAG07353.1
NCBI Locus Tag PA3966
protein_id(GenBank) gb|AAG07353.1|AE004814_8|gnl|PseudoCAP|PA3966
TIGR NTL03PA03966
UniParc UPI00000C5BA2
UniProtKB Acc Q9HX50
UniProtKB ID Q9HX50_PSEAE
UniRef100 UniRef100_W0YUY2
UniRef50 UniRef50_F3L4M6
UniRef90 UniRef90_W0YUY2

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Product Name Confidence: Class 4
Synonyms
Evidence for Translation
Charge (pH 7) -1.02
Kyte-Doolittle Hydrophobicity Value 1.161
Molecular Weight (kDa) 7.5
Isoelectric Point (pI) 4.77

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 31 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001713 (504 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA3966

Human Homologs

References

Genome-wide identification of Pseudomonas aeruginosa exported proteins using a consensus computational strategy combined with a laboratory-based PhoA fusion screen.
Lewenza S, Gardy JL, Brinkman FS, Hancock RE
Genome Res 2005 Feb;15(2):321-9
PubMed ID: 15687295