Pseudomonas aeruginosa PAO1, PA4084 (cupB3)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest
Locus Tag
PA4084
Name
cupB3
Synonym: htrE
Replicon chromosome
Genomic location 4565421 - 4567955 (- strand)
Transposon Mutants 4 transposon mutants in PAO1
Transposon Mutants in orthologs 1 transposon mutants in orthologs

Cross-References

RefSeq NP_252773.1
GI 15599279
Affymetrix PA4084_at
Entrez 878724
GenBank AAG07471.1
INSDC AAG07471.1
NCBI Locus Tag PA4084
protein_id(GenBank) gb|AAG07471.1|AE004824_6|gnl|PseudoCAP|PA4084
TIGR NTL03PA04084
UniParc UPI00000C5BFE
UniProtKB Acc Q9HWU4
UniProtKB ID Q9HWU4_PSEAE
UniRef100 UniRef100_Q9HWU4
UniRef50 UniRef50_Q4KGP2
UniRef90 UniRef90_Q9HWU4

Product

Feature Type CDS
Coding Frame 1
Product Name
usher CupB3
Product Name Confidence: Class 2
Synonyms probable fimbrial biogenesis usher protein
Evidence for Translation
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
Charge (pH 7) 11.30
Kyte-Doolittle Hydrophobicity Value -0.412
Molecular Weight (kDa) 91.1
Isoelectric Point (pI) 9.22

Subcellular localization

Individual Mappings
Localization Confidence PMID
Outer Membrane Class 3
Outer Membrane Class 2
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 62 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001604 (354 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA4084
Search term: cupB3
Search term: usher CupB3

Human Homologs

References

No references are associated with this feature.