Pseudomonas aeruginosa PAO1, PA4135

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest
Locus Tag
PA4135
Name
Replicon chromosome
Genomic location 4624581 - 4625003 (- strand)
Transposon Mutants 3 transposon mutants in PAO1
Transposon Mutants in orthologs 1 transposon mutants in orthologs

Cross-References

RefSeq NP_252824.1
GI 15599330
Affymetrix PA4135_at
DNASU PaCD00007801
Entrez 880085
GenBank AAG07522.1
INSDC AAG07522.1
NCBI Locus Tag PA4135
protein_id(GenBank) gb|AAG07522.1|AE004830_3|gnl|PseudoCAP|PA4135
TIGR NTL03PA04135
UniParc UPI00000C5C2C
UniProtKB Acc Q9HWP6
UniProtKB ID Q9HWP6_PSEAE
UniRef100 UniRef100_W0YZM2
UniRef50 UniRef50_A0A0A1HPC5
UniRef90 UniRef90_A6UZV7

Product

Feature Type CDS
Coding Frame 1
Product Name
probable transcriptional regulator
Product Name Confidence: Class 3
Synonyms
Evidence for Translation
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
Charge (pH 7) 8.17
Kyte-Doolittle Hydrophobicity Value -0.621
Molecular Weight (kDa) 16.4
Isoelectric Point (pI) 10.51

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
2FBI TRANSCRIPTION 12/09/05 The crystal structure of transcriptional regulator PA4135 Pseudomonas aeruginosa 2.1 X-RAY DIFFRACTION 100.0

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 285 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001564 (390 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA4135

Human Homologs

References

No references are associated with this feature.