Pseudomonas aeruginosa PAO1, PA4137

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest
Locus Tag
PA4137
Name
Synonym: opdL
Replicon chromosome
Genomic location 4626662 - 4627918 (+ strand)
Transposon Mutants 2 transposon mutants in PAO1
Transposon Mutants in orthologs 2 transposon mutants in orthologs

Cross-References

RefSeq NP_252826.1
GI 15599332
Affymetrix PA4137_at
Entrez 880091
GenBank AAG07524.1
INSDC AAG07524.1
NCBI Locus Tag PA4137
protein_id(GenBank) gb|AAG07524.1|AE004830_5|gnl|PseudoCAP|PA4137
TIGR NTL03PA04137
UniParc UPI00000C5C2E
UniProtKB Acc Q9HWP4
UniProtKB ID Q9HWP4_PSEAE
UniRef100 UniRef100_K1DR61
UniRef50 UniRef50_A6UZV4
UniRef90 UniRef90_A6UZV4

Product

Feature Type CDS
Coding Frame 1
Product Name
probable porin
Product Name Confidence: Class 3
Synonyms
Evidence for Translation
Charge (pH 7) 0.62
Kyte-Doolittle Hydrophobicity Value -0.348
Molecular Weight (kDa) 46.4
Isoelectric Point (pI) 7.21

Subcellular localization

Individual Mappings
Localization Confidence PMID
Outer Membrane Class 3
Outer Membrane Class 2
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
2Y0H TRANSPORT PROTEIN 12/02/10 Crystal Structure of Pseudomonas Aeruginosa OpdL PSEUDOMONAS AERUGINOSA 2.2 X-RAY DIFFRACTION 100.0
3T0S MEMBRANE PROTEIN 07/20/11 Crystal structure of Pseudomonas aeruginosa OccK4 (OpdL) Pseudomonas aeruginosa 2.2 X-RAY DIFFRACTION 100.0

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 21 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001562 (366 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA4137
Search term: probable porin

Human Homologs

References

No references are associated with this feature.