Strain |
Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest |
Locus Tag |
PA4242
|
Name |
rpmJ
|
Replicon | chromosome |
Genomic location | 4756979 - 4757095 (- strand) |
RefSeq | NP_252932.1 |
GI | 15599438 |
Affymetrix | PA4242_rpmJ_at |
DNASU | PaCD00007840 |
Entrez | 881839 |
GenBank | AAG07630.1 |
INSDC | AAG07630.1 |
NCBI Locus Tag | PA4242 |
protein_id(GenBank) | gb|AAG07630.1|AE004841_8|gnl|PseudoCAP|PA4242 |
TIGR | NTL03PA04243 |
UniParc | UPI0000134033 |
UniProtKB Acc | Q9HWF6 |
UniProtKB ID | RL36_PSEAE |
UniRef100 | UniRef100_A6UZK9 |
UniRef50 | UniRef50_Q6CZZ1 |
UniRef90 | UniRef90_C1DKN4 |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
50S ribosomal protein L36
|
Synonyms |
ribosomal protein B |
Evidence for Translation | |
Charge (pH 7) | 10.13 |
Kyte-Doolittle Hydrophobicity Value | -0.634 |
Molecular Weight (kDa) | 4.4 |
Isoelectric Point (pI) | 11.89 |
Individual Mappings | |
Additional evidence for subcellular localization |
Accession | Header | Accession Date | Compound | Source | Resolution | Method | Percent Identity |
6SPD | RIBOSOME | 09/01/19 | Pseudomonas aeruginosa 50s ribosome from a clinical isolate | Pseudomonas aeruginosa | 3.28 | ELECTRON MICROSCOPY | 100.0 |
7UNU | RIBOSOME | 04/11/22 | Pseudomonas aeruginosa 70S ribosome initiation complex bound to compact IF2-GDP (composite structure I-B) | Escherichia coli; Pseudomonas aeruginosa PAO1; SYNTHETIC CONSTRUCT | 2.9 | ELECTRON MICROSCOPY | 100.0 |
6SPG | RIBOSOME | 09/01/19 | Pseudomonas aeruginosa 70s ribosome from a clinical isolate | Pseudomonas aeruginosa | 3.34 | ELECTRON MICROSCOPY | 100.0 |
6SPF | RIBOSOME | 09/01/19 | Pseudomonas aeruginosa 70s ribosome from an aminoglycoside resistant clinical isolate | Pseudomonas aeruginosa | 2.89 | ELECTRON MICROSCOPY | 100.0 |
7UNV | RIBOSOME | 04/11/22 | Pseudomonas aeruginosa 70S ribosome initiation complex bound to IF2-GDPCP (structure II-A) | Escherichia coli; Pseudomonas aeruginosa PAO1; SYNTHETIC CONSTRUCT | 2.7 | ELECTRON MICROSCOPY | 100.0 |
7UNR | RIBOSOME | 04/11/22 | Pseudomonas aeruginosa 70S ribosome initiation complex bound to compact IF2-GDP (composite structure I-A) | Escherichia coli; Pseudomonas aeruginosa PAO1; SYNTHETIC CONSTRUCT | 2.9 | ELECTRON MICROSCOPY | 100.0 |
6SPB | RIBOSOME | 09/01/19 | Pseudomonas aeruginosa 50s ribosome from a clinical isolate with a mutation in uL6 | Pseudomonas aeruginosa | 2.82 | ELECTRON MICROSCOPY | 100.0 |
7UNW | RIBOSOME | 04/11/22 | Pseudomonas aeruginosa 70S ribosome initiation complex bound to IF2-GDPCP (structure II-B) | Escherichia coli; Pseudomonas aeruginosa PAO1; SYNTHETIC CONSTRUCT | 2.6 | ELECTRON MICROSCOPY | 100.0 |
Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 435 genera
|
Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
Pseudomonas Ortholog Group |
POG001468 (437 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: PA4242
Search term: rpmJ
Search term: 50S ribosomal protein L36
|
Primary structures of and genes for new ribosomal proteins A and B in Escherichia coli.
Wada A, Sako T
J Biochem 1987 Mar;101(3):817-20
PubMed ID: 3298224
|