Strain |
Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest |
Locus Tag |
PA4260
|
Name |
rplB
|
Replicon | chromosome |
Genomic location | 4764880 - 4765701 (- strand) |
RefSeq | NP_252950.1 |
GI | 15599456 |
Affymetrix | PA4260_rplB_at |
DNASU | PaCD00007849 |
Entrez | 881749 |
GenBank | AAG07648.1 |
INSDC | AAG07648.1 |
NCBI Locus Tag | PA4260 |
protein_id(GenBank) | gb|AAG07648.1|AE004841_26|gnl|PseudoCAP|PA4260 |
TIGR | NTL03PA04261 |
UniParc | UPI00000C5C8A |
UniProtKB Acc | Q9HWD8 |
UniProtKB ID | RL2_PSEAE |
UniRef100 | UniRef100_A6UZJ1 |
UniRef50 | UniRef50_Q85FI1 |
UniRef90 | UniRef90_Q889W8 |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
50S ribosomal protein L2
|
Synonyms | |
Evidence for Translation |
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
|
Charge (pH 7) | 35.33 |
Kyte-Doolittle Hydrophobicity Value | -0.604 |
Molecular Weight (kDa) | 29.6 |
Isoelectric Point (pI) | 11.79 |
Individual Mappings | |
Additional evidence for subcellular localization |
Accession | Header | Accession Date | Compound | Source | Resolution | Method | Percent Identity |
7UNW | RIBOSOME | 04/11/22 | Pseudomonas aeruginosa 70S ribosome initiation complex bound to IF2-GDPCP (structure II-B) | Escherichia coli; Pseudomonas aeruginosa PAO1; SYNTHETIC CONSTRUCT | 2.6 | ELECTRON MICROSCOPY | 100.0 |
6SPG | RIBOSOME | 09/01/19 | Pseudomonas aeruginosa 70s ribosome from a clinical isolate | Pseudomonas aeruginosa | 3.34 | ELECTRON MICROSCOPY | 100.0 |
7UNR | RIBOSOME | 04/11/22 | Pseudomonas aeruginosa 70S ribosome initiation complex bound to compact IF2-GDP (composite structure I-A) | Escherichia coli; Pseudomonas aeruginosa PAO1; SYNTHETIC CONSTRUCT | 2.9 | ELECTRON MICROSCOPY | 100.0 |
6SPF | RIBOSOME | 09/01/19 | Pseudomonas aeruginosa 70s ribosome from an aminoglycoside resistant clinical isolate | Pseudomonas aeruginosa | 2.89 | ELECTRON MICROSCOPY | 100.0 |
7UNU | RIBOSOME | 04/11/22 | Pseudomonas aeruginosa 70S ribosome initiation complex bound to compact IF2-GDP (composite structure I-B) | Escherichia coli; Pseudomonas aeruginosa PAO1; SYNTHETIC CONSTRUCT | 2.9 | ELECTRON MICROSCOPY | 100.0 |
6SPB | RIBOSOME | 09/01/19 | Pseudomonas aeruginosa 50s ribosome from a clinical isolate with a mutation in uL6 | Pseudomonas aeruginosa | 2.82 | ELECTRON MICROSCOPY | 100.0 |
7UNV | RIBOSOME | 04/11/22 | Pseudomonas aeruginosa 70S ribosome initiation complex bound to IF2-GDPCP (structure II-A) | Escherichia coli; Pseudomonas aeruginosa PAO1; SYNTHETIC CONSTRUCT | 2.7 | ELECTRON MICROSCOPY | 100.0 |
6SPD | RIBOSOME | 09/01/19 | Pseudomonas aeruginosa 50s ribosome from a clinical isolate | Pseudomonas aeruginosa | 3.28 | ELECTRON MICROSCOPY | 100.0 |
Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 668 genera
|
Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
Pseudomonas Ortholog Group |
POG001450 (525 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: PA4260
Search term: rplB
Search term: 50S ribosomal protein L2
|
Ensembl
110, assembly
GRCh38.p14
|
ribosomal protein L8 [Source:HGNC Symbol;Acc:HGNC:10368]
E-value:
3.2e-16
Percent Identity:
31.4
|
Ensembl
110, assembly
GRCh38.p14
|
ribosomal protein L8 [Source:HGNC Symbol;Acc:HGNC:10368]
E-value:
3.2e-16
Percent Identity:
31.4
|
Ensembl
110, assembly
GRCh38.p14
|
ribosomal protein L8 [Source:HGNC Symbol;Acc:HGNC:10368]
E-value:
3.2e-16
Percent Identity:
31.4
|
Structure of the Escherichia coli S10 ribosomal protein operon.
Zurawski G, Zurawski SM
Nucleic Acids Res 1985 Jun 25;13(12):4521-6
PubMed ID: 3892488
|
Functional implications of ribosomal protein L2 in protein biosynthesis as shown by in vivo replacement studies.
Uhlein M, Weglöhner W, Urlaub H, Wittmann-Liebold B
Biochem J 1998 Apr 15;331 ( Pt 2)(Pt 2):423-30
PubMed ID: 9531480
|