Strain |
Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest |
Locus Tag |
PA4267
|
Name |
rpsG
|
Replicon | chromosome |
Genomic location | 4771186 - 4771656 (- strand) |
Transposon Mutants | 1 transposon mutants in PAO1 |
RefSeq | NP_252957.1 |
GI | 15599463 |
Affymetrix | PA4267_rpsG_at |
Entrez | 881745 |
GenBank | AAG07655.1 |
INSDC | AAG07655.1 |
NCBI Locus Tag | PA4267 |
protein_id(GenBank) | gb|AAG07655.1|AE004842_4|gnl|PseudoCAP|PA4267 |
TIGR | NTL03PA04268 |
UniParc | UPI0000135112 |
UniProtKB Acc | Q9HWD1 |
UniProtKB ID | RS7_PSEAE |
UniRef100 | UniRef100_A6UZI4 |
UniRef50 | UniRef50_P9WH28 |
UniRef90 | UniRef90_Q889X5 |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
30S ribosomal protein S7
|
Synonyms | |
Evidence for Translation |
Detected using LC-MS/MS (17.50 kDa, PMID:21751344)
Detected by two-dimensional gel electrophoresis and mass spectral analysis(PMID:21863142).
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
|
Charge (pH 7) | 14.71 |
Kyte-Doolittle Hydrophobicity Value | -0.485 |
Molecular Weight (kDa) | 17.5 |
Isoelectric Point (pI) | 10.92 |
Individual Mappings | |
Additional evidence for subcellular localization |
Accession | Header | Accession Date | Compound | Source | Resolution | Method | Percent Identity |
6SPE | RIBOSOME | 09/01/19 | Pseudomonas aeruginosa 30s ribosome from a clinical isolate | Pseudomonas aeruginosa | 3.6 | ELECTRON MICROSCOPY | 100.0 |
6SPC | RIBOSOME | 09/01/19 | Pseudomonas aeruginosa 30s ribosome from an aminoglycoside resistant clinical isolate | Pseudomonas aeruginosa | 2.95 | ELECTRON MICROSCOPY | 100.0 |
7UNR | RIBOSOME | 04/11/22 | Pseudomonas aeruginosa 70S ribosome initiation complex bound to compact IF2-GDP (composite structure I-A) | Escherichia coli; Pseudomonas aeruginosa PAO1; SYNTHETIC CONSTRUCT | 2.9 | ELECTRON MICROSCOPY | 100.0 |
6SPG | RIBOSOME | 09/01/19 | Pseudomonas aeruginosa 70s ribosome from a clinical isolate | Pseudomonas aeruginosa | 3.34 | ELECTRON MICROSCOPY | 100.0 |
7UNW | RIBOSOME | 04/11/22 | Pseudomonas aeruginosa 70S ribosome initiation complex bound to IF2-GDPCP (structure II-B) | Escherichia coli; Pseudomonas aeruginosa PAO1; SYNTHETIC CONSTRUCT | 2.6 | ELECTRON MICROSCOPY | 100.0 |
7UNU | RIBOSOME | 04/11/22 | Pseudomonas aeruginosa 70S ribosome initiation complex bound to compact IF2-GDP (composite structure I-B) | Escherichia coli; Pseudomonas aeruginosa PAO1; SYNTHETIC CONSTRUCT | 2.9 | ELECTRON MICROSCOPY | 100.0 |
7UNV | RIBOSOME | 04/11/22 | Pseudomonas aeruginosa 70S ribosome initiation complex bound to IF2-GDPCP (structure II-A) | Escherichia coli; Pseudomonas aeruginosa PAO1; SYNTHETIC CONSTRUCT | 2.7 | ELECTRON MICROSCOPY | 100.0 |
6SPF | RIBOSOME | 09/01/19 | Pseudomonas aeruginosa 70s ribosome from an aminoglycoside resistant clinical isolate | Pseudomonas aeruginosa | 2.89 | ELECTRON MICROSCOPY | 100.0 |
Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 646 genera
|
Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
Pseudomonas Ortholog Group |
POG001444 (533 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: PA4267
Search term: rpsG
Search term: 30S ribosomal protein S7
|
Ensembl
110, assembly
GRCh38.p14
|
mitochondrial ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:14499]
E-value:
1.3e-14
Percent Identity:
31.6
|
Ensembl
110, assembly
GRCh38.p14
|
mitochondrial ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:14499]
E-value:
1.3e-14
Percent Identity:
31.6
|
Ensembl
110, assembly
GRCh38.p14
|
mitochondrial ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:14499]
E-value:
1.3e-14
Percent Identity:
31.6
|
Ensembl
110, assembly
GRCh38.p14
|
mitochondrial ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:14499]
E-value:
1.3e-14
Percent Identity:
31.6
|
DNA sequences from the str operon of Escherichia coli.
Post LE, Nomura M
J Biol Chem 1980 May 25;255(10):4660-6
PubMed ID: 6989816
|
Comparison of the complete sequence of the str operon in Salmonella typhimurium and Escherichia coli.
Johanson U, Hughes D
Gene 1992 Oct 12;120(1):93-8
PubMed ID: 1398129
|
Post-transcriptional regulation of the str operon in Escherichia coli. Ribosomal protein S7 inhibits coupled translation of S7 but not its independent translation.
Saito K, Mattheakis LC, Nomura M
J Mol Biol 1994 Jan 7;235(1):111-24
PubMed ID: 7507167
|
Comparisons of Two Proteomic Analyses of Non-Mucoid and Mucoid Pseudomonas aeruginosa Clinical Isolates from a Cystic Fibrosis Patient.
Rao J, Damron FH, Basler M, Digiandomenico A, Sherman NE, Fox JW, Mekalanos JJ, Goldberg JB
Front Microbiol 2011;2:162
PubMed ID: 21863142
|
Proteomic analysis of outer membrane vesicles derived from Pseudomonas aeruginosa.
Choi DS, Kim DK, Choi SJ, Lee J, Choi JP, Rho S, Park SH, Kim YK, Hwang D, Gho YS
Proteomics 2011 Aug;11(16):3424-9
PubMed ID: 21751344
|