Pseudomonas aeruginosa PAO1, PA4420

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest
Locus Tag
PA4420
Name
Synonym: yabC
Synonym: ylxA
Synonym: mraW
Replicon chromosome
Genomic location 4954630 - 4955571 (- strand)

Cross-References

RefSeq NP_253110.1
GI 15599616
Affymetrix PA4420_at
DNASU PaCD00007915
Entrez 881254
GenBank AAG07808.1
INSDC AAG07808.1
NCBI Locus Tag PA4420
protein_id(GenBank) gb|AAG07808.1|AE004856_19|gnl|PseudoCAP|PA4420
TIGR NTL03PA04421
UniParc UPI000012F4F4
UniProtKB Acc Q9HVZ5
UniProtKB ID RSMH_PSEAE
UniRef100 UniRef100_Q9HVZ5
UniRef50 UniRef50_Q48EF0
UniRef90 UniRef90_Q9HVZ5

Product

Feature Type CDS
Coding Frame 1
Product Name
conserved hypothetical protein
Product Name Confidence: Class 4
Synonyms
Evidence for Translation
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
Charge (pH 7) 1.19
Kyte-Doolittle Hydrophobicity Value -0.407
Molecular Weight (kDa) 34.6
Isoelectric Point (pI) 7.73

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 591 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004010 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA4420

Human Homologs

Ensembl 110, assembly GRCh38.p14
methyltransferase like 15 [Source:HGNC Symbol;Acc:HGNC:26606]
E-value: 2.0e-46
Percent Identity: 39.3

References

No references are associated with this feature.