Pseudomonas aeruginosa PAO1, PA4852

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest
Locus Tag
PA4852
Name
Synonym: yhdG
Replicon chromosome
Genomic location 5447648 - 5448646 (+ strand)
Transposon Mutants 2 transposon mutants in PAO1
Transposon Mutants in orthologs 2 transposon mutants in orthologs

Cross-References

RefSeq NP_253539.1
GI 15600045
Affymetrix PA4852_at
DNASU PaCD00008105
Entrez 878659
GenBank AAG08237.1
INSDC AAG08237.1
NCBI Locus Tag PA4852
protein_id(GenBank) gb|AAG08237.1|AE004898_8|gnl|PseudoCAP|PA4852
TIGR NTL03PA04853
UniParc UPI00000C5E3C
UniProtKB Acc Q9HUW1
UniProtKB ID DUSB_PSEAE
UniRef100 UniRef100_Q9HUW1
UniRef50 UniRef50_Q9HUW1
UniRef90 UniRef90_Q9HUW1

Product

Feature Type CDS
Coding Frame 1
Product Name
conserved hypothetical protein
Product Name Confidence: Class 4
Synonyms
Evidence for Translation
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
Charge (pH 7) 2.57
Kyte-Doolittle Hydrophobicity Value -0.139
Molecular Weight (kDa) 36.4
Isoelectric Point (pI) 8.00

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 566 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004481 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA4852

Human Homologs

Ensembl 110, assembly GRCh38.p14
dihydrouridine synthase 3 like [Source:HGNC Symbol;Acc:HGNC:26920]
E-value: 1.1e-26
Percent Identity: 35.6

References

No references are associated with this feature.