Pseudomonas aeruginosa PAO1, PA4874

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest
Locus Tag
PA4874
Name
Synonym: psiF
Replicon chromosome
Genomic location 5471626 - 5472042 (- strand)
Transposon Mutants 2 transposon mutants in PAO1
Transposon Mutants in orthologs 1 transposon mutants in orthologs

Cross-References

RefSeq NP_253561.1
GI 15600067
Affymetrix PA4874_at
Entrez 879705
GenBank AAG08259.1
INSDC AAG08259.1
NCBI Locus Tag PA4874
protein_id(GenBank) gb|AAG08259.1|AE004901_1|gnl|PseudoCAP|PA4874
TIGR NTL03PA04875
UniParc UPI00000C5E50
UniProtKB Acc Q9HUT9
UniProtKB ID Q9HUT9_PSEAE
UniRef100 UniRef100_Q9HUT9
UniRef50 UniRef50_Q9HUT9
UniRef90 UniRef90_Q9HUT9

Product

Feature Type CDS
Coding Frame 1
Product Name
conserved hypothetical protein
Product Name Confidence: Class 4
Synonyms
Evidence for Translation
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
Charge (pH 7) 12.04
Kyte-Doolittle Hydrophobicity Value -0.368
Molecular Weight (kDa) 14.4
Isoelectric Point (pI) 10.33

Subcellular localization

Individual Mappings
Localization Confidence PMID
Periplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 49 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004502 (482 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA4874

Human Homologs

References

Genome-wide identification of Pseudomonas aeruginosa exported proteins using a consensus computational strategy combined with a laboratory-based PhoA fusion screen.
Lewenza S, Gardy JL, Brinkman FS, Hancock RE
Genome Res 2005 Feb;15(2):321-9
PubMed ID: 15687295
Identification of phosphate starvation-inducible genes in Escherichia coli K-12 by DNA sequence analysis of psi::lacZ(Mu d1) transcriptional fusions.
Metcalf WW, Steed PM, Wanner BL
J Bacteriol 1990 Jun;172(6):3191-200
PubMed ID: 2160940