Pseudomonas aeruginosa PAO1, PA4897

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest
Locus Tag
PA4897
Name
Synonym: optI
Replicon chromosome
Genomic location 5491346 - 5494315 (+ strand)
Transposon Mutants 3 transposon mutants in PAO1
Transposon Mutants in orthologs 1 transposon mutants in orthologs
Commenttranscription induced by vanillate

Cross-References

RefSeq NP_253584.1
GI 15600090
Affymetrix PA4897_at
Entrez 879747
GenBank AAG08282.1
INSDC AAG08282.1
NCBI Locus Tag PA4897
protein_id(GenBank) gb|AAG08282.1|AE004902_10|gnl|PseudoCAP|PA4897
TIGR NTL03PA04898
UniParc UPI00000C5E67
UniProtKB Acc Q9HUR6
UniProtKB ID Q9HUR6_PSEAE
UniRef100 UniRef100_Q9HUR6
UniRef50 UniRef50_Q9HUR6
UniRef90 UniRef90_Q9HUR6

Product

Feature Type CDS
Coding Frame 1
Product Name
TonB-dependent receptor
Product Name Confidence: Class 2
Synonyms hypothetical protein
Evidence for Translation
Charge (pH 7) 0.62
Kyte-Doolittle Hydrophobicity Value -0.479
Molecular Weight (kDa) 108.3
Isoelectric Point (pI) 7.13

Subcellular localization

Individual Mappings
Localization Confidence PMID
Outer Membrane Class 3
Outer Membrane Class 2
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 125 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004521 (333 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA4897

Human Homologs

References

A new type of hemophore-dependent heme acquisition system of Serratia marcescens reconstituted in Escherichia coli.
Ghigo JM, Létoffé S, Wandersman C
J Bacteriol 1997 Jun;179(11):3572-9
PubMed ID: 9171402
Role of the novel OprD family of porins in nutrient uptake in Pseudomonas aeruginosa.
Tamber S, Ochs MM, Hancock RE
J Bacteriol 2006 Jan;188(1):45-54
PubMed ID: 16352820