Pseudomonas aeruginosa PAO1, PA4928

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest
Locus Tag
PA4928
Name
Synonym: ygiR
Synonym: ygiQ
Replicon chromosome
Genomic location 5528659 - 5530902 (- strand)
Transposon Mutants 6 transposon mutants in PAO1
Transposon Mutants in orthologs 3 transposon mutants in orthologs

Cross-References

RefSeq NP_253615.1
GI 15600121
Affymetrix PA4928_at
Entrez 879696
GenBank AAG08313.1
INSDC AAG08313.1
NCBI Locus Tag PA4928
protein_id(GenBank) gb|AAG08313.1|AE004906_1|gnl|PseudoCAP|PA4928
TIGR NTL03PA04929
UniParc UPI00000C5E82
UniProtKB Acc Q9HUN6
UniProtKB ID Y4928_PSEAE
UniRef100 UniRef100_Q9HUN6
UniRef50 UniRef50_Q46861
UniRef90 UniRef90_Q88DF3

Product

Feature Type CDS
Coding Frame 1
Product Name
conserved hypothetical protein
Product Name Confidence: Class 4
Synonyms
Evidence for Translation
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
Charge (pH 7) 20.74
Kyte-Doolittle Hydrophobicity Value -0.509
Molecular Weight (kDa) 83.9
Isoelectric Point (pI) 9.30

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 193 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004544 (534 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA4928

Human Homologs

References

No references are associated with this feature.