Pseudomonas aeruginosa PAO1, PA4948

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest
Locus Tag
PA4948
Name
Synonym: yjeE
Replicon chromosome
Genomic location 5553117 - 5553584 (- strand)
Transposon Mutants 1 transposon mutants in PAO1

Cross-References

RefSeq NP_253635.1
GI 15600141
Affymetrix PA4948_at
DNASU PaCD00008141
Entrez 878066
GenBank AAG08333.1
INSDC AAG08333.1
NCBI Locus Tag PA4948
protein_id(GenBank) gb|AAG08333.1|AE004907_11|gnl|PseudoCAP|PA4948
TIGR NTL03PA04949
UniParc UPI00000C5E8C
UniProtKB Acc Q9HUL6
UniProtKB ID Q9HUL6_PSEAE
UniRef100 UniRef100_W0Z266
UniRef50 UniRef50_B3PDC8
UniRef90 UniRef90_A6VD61

Product

Feature Type CDS
Coding Frame 1
Product Name
conserved hypothetical protein
Product Name Confidence: Class 4
Synonyms
Evidence for Translation
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
Charge (pH 7) -7.11
Kyte-Doolittle Hydrophobicity Value 0.080
Molecular Weight (kDa) 16.5
Isoelectric Point (pI) 4.66

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 575 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004563 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA4948

Human Homologs

References

Analysis of the Escherichia coli genome VI: DNA sequence of the region from 92.8 through 100 minutes.
Burland V, Plunkett G 3rd, Sofia HJ, Daniels DL, Blattner FR
Nucleic Acids Res 1995 Jun 25;23(12):2105-19
PubMed ID: 7610040